Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15206-201ENSMUST00000119143 454 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm15603-201ENSMUST00000119252 492 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm25806-201ENSMUST00000122782 122 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm16250-201ENSMUST00000148974 256 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm26041-201ENSMUST00000158148 108 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm22435-201ENSMUST00000158552 128 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm24819-201ENSMUST00000175094 166 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm24168-201ENSMUST00000178825 107 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Mir6391-201ENSMUST00000184391 104 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.3□□□□□ -1.56
Clp1Q99LI9 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm22974-201ENSMUST00000083301 103 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm25410-201ENSMUST00000083758 137 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.3□□□□□ -1.56
Clp1Q99LI9 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clp1Q99LI9 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Mir743b-201ENSMUST00000104751 77 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm12779-201ENSMUST00000121496 143 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm11200-201ENSMUST00000121698 448 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm11403-201ENSMUST00000122195 369 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Zakit-201ENSMUST00000157677 308 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm22263-201ENSMUST00000180060 104 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm27834-201ENSMUST00000183427 125 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Mir6372-201ENSMUST00000185114 109 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm37128-201ENSMUST00000192599 232 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm43028-201ENSMUST00000202561 481 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm44402-201ENSMUST00000203677 238 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm44523-201ENSMUST00000205616 417 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm8942-201ENSMUST00000217892 400 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm23721-201ENSMUST00000083005 107 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm23650-201ENSMUST00000083355 70 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Clp1Q99LI9 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.29□□□□□ -1.56
Clp1Q99LI9 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Snord66-201ENSMUST00000104051 75 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm14086-201ENSMUST00000117152 173 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm6584-201ENSMUST00000119671 447 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm13518-201ENSMUST00000120018 233 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm25913-201ENSMUST00000157617 135 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm24191-201ENSMUST00000157977 122 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Mir5129-201ENSMUST00000174938 78 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm19498-201ENSMUST00000191128 331 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm2147-201ENSMUST00000193588 639 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm19202-201ENSMUST00000198096 808 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm18540-201ENSMUST00000204025 526 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm44208-201ENSMUST00000205199 421 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm44648-201ENSMUST00000208267 329 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.28□□□□□ -1.56
Clp1Q99LI9 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Clp1Q99LI9 Gm26330-201ENSMUST00000082817 104 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms