Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm22977-201ENSMUST00000082615 107 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Snora64-201ENSMUST00000104521 134 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm25563-201ENSMUST00000104603 74 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm25315-201ENSMUST00000116823 121 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm15426-201ENSMUST00000117823 556 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm11219-201ENSMUST00000118565 358 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm14669-201ENSMUST00000118841 250 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm14815-201ENSMUST00000120060 488 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm14916-201ENSMUST00000121904 204 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm14564-201ENSMUST00000122159 294 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm26001-201ENSMUST00000157989 103 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm24901-201ENSMUST00000158125 110 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm24224-201ENSMUST00000158828 258 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Mir5098-201ENSMUST00000175320 82 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm28146-201ENSMUST00000185517 701 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm28574-201ENSMUST00000185757 699 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm28397-201ENSMUST00000187970 699 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm29366-201ENSMUST00000190481 699 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm9227-201ENSMUST00000194733 566 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm20039-201ENSMUST00000210329 394 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.72□□□□□ -1.65
Ushbp1Q8R370 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ushbp1Q8R370 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Mir667-201ENSMUST00000102441 92 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm26075-201ENSMUST00000104062 121 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm6071-201ENSMUST00000119561 440 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm8757-201ENSMUST00000119660 372 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm12739-201ENSMUST00000119769 382 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm14605-201ENSMUST00000120599 268 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm25965-201ENSMUST00000157170 93 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm17109-201ENSMUST00000163985 358 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm5551-201ENSMUST00000199720 690 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm43028-201ENSMUST00000202561 481 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm43026-201ENSMUST00000202972 325 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Gm44371-201ENSMUST00000204148 467 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC4.71□□□□□ -1.66
Ushbp1Q8R370 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ushbp1Q8R370 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms