Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Mir6418-201ENSMUST00000185075 115 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm29148-201ENSMUST00000188140 336 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm10038-201ENSMUST00000077233 441 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm3940-201ENSMUST00000105087 432 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm14385-201ENSMUST00000116315 876 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm11876-201ENSMUST00000120002 269 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm12095-201ENSMUST00000121962 816 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm25806-201ENSMUST00000122782 122 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm22968-201ENSMUST00000157955 118 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm22584-201ENSMUST00000177935 92 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm25194-201ENSMUST00000177987 79 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm28343-201ENSMUST00000185386 112 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm29413-201ENSMUST00000186019 880 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm29639-201ENSMUST00000188375 580 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm18296-201ENSMUST00000192475 783 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm43550-201ENSMUST00000200597 303 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm43224-201ENSMUST00000201567 898 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm45080-201ENSMUST00000206648 283 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm45316-201ENSMUST00000210128 162 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm18488-201ENSMUST00000215082 364 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm2628-201ENSMUST00000218019 426 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.41□□□□□ -1.7
Syne4Q8CII8 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Syne4Q8CII8 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Syne4Q8CII8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Syne4Q8CII8 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.4□□□□□ -1.7
Syne4Q8CII8 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.4□□□□□ -1.7
Syne4Q8CII8 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
Syne4Q8CII8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Syne4Q8CII8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Syne4Q8CII8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Syne4Q8CII8 Gm22310-201ENSMUST00000157509 116 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Mir5098-201ENSMUST00000175320 82 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Gm8423-201ENSMUST00000211387 607 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Gm2446-201ENSMUST00000220144 772 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.4□□□□□ -1.71
Syne4Q8CII8 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Syne4Q8CII8 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.4□□□□□ -1.71
Syne4Q8CII8 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Syne4Q8CII8 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Neat1-201ENSMUST00000173672 20771 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Mir599-201ENSMUST00000102378 88 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Mir667-201ENSMUST00000102441 92 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm24831-201ENSMUST00000116778 126 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm25507-201ENSMUST00000116981 144 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm11262-201ENSMUST00000119326 833 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm15060-201ENSMUST00000119550 948 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm12739-201ENSMUST00000119769 382 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm14766-201ENSMUST00000121689 367 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Syne4Q8CII8 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms