Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm20399-201ENSMUST00000174652 132 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Mir1251-201ENSMUST00000175486 84 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Mir7006-201ENSMUST00000183624 69 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm27163-201ENSMUST00000184767 409 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm29576-201ENSMUST00000188020 678 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm19224-201ENSMUST00000190477 793 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm28354-201ENSMUST00000190904 678 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm43096-201ENSMUST00000196173 421 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm46146-201ENSMUST00000217483 346 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25699-201ENSMUST00000082896 167 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12102-201ENSMUST00000118251 604 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm23183-201ENSMUST00000122595 323 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm23592-201ENSMUST00000157859 117 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm16588-201ENSMUST00000162889 355 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25412-201ENSMUST00000180258 107 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm26746-201ENSMUST00000181722 487 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm18775-201ENSMUST00000190763 586 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm31123-201ENSMUST00000192094 666 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm43070-201ENSMUST00000196938 415 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm42814-201ENSMUST00000199370 460 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm44254-201ENSMUST00000204184 322 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm8274-201ENSMUST00000219820 463 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.44□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12598-201ENSMUST00000117333 830 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm11406-201ENSMUST00000117418 484 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12543-201ENSMUST00000120410 543 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm26271-201ENSMUST00000158349 104 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm22531-201ENSMUST00000158819 140 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm9613-201ENSMUST00000171662 196 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm23269-201ENSMUST00000178701 107 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm11394-201ENSMUST00000181421 517 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm18505-201ENSMUST00000187360 790 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm18414-201ENSMUST00000210858 694 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm8423-201ENSMUST00000211387 607 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.43□□□□□ -1.86
Ccdc28bQ8CEG5 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms