Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm25938-201ENSMUST00000104139 166 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm23960-201ENSMUST00000157206 131 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm18921-201ENSMUST00000221798 366 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 AC133598.4-202ENSMUST00000225267 469 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm25636-201ENSMUST00000082666 133 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm18953-201ENSMUST00000175694 300 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm29356-201ENSMUST00000186935 373 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm43393-201ENSMUST00000200147 194 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm43415-201ENSMUST00000201934 750 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm14794-201ENSMUST00000118181 192 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm7421-201ENSMUST00000119298 639 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm7365-201ENSMUST00000120877 639 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm25460-201ENSMUST00000157954 127 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm16232-201ENSMUST00000162856 167 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm28064-201ENSMUST00000185639 858 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm37550-201ENSMUST00000193230 463 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm25202-201ENSMUST00000082838 191 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Gm42484-201ENSMUST00000196075 2104 ntBASIC2.11□□□□□ -2.07
Col6a6Q8C6K9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm6373-201ENSMUST00000121026 360 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm25902-201ENSMUST00000158493 318 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Snord14c-201ENSMUST00000101927 86 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm22713-201ENSMUST00000116895 130 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Trbv10-201ENSMUST00000168322 289 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm21959-201ENSMUST00000178439 452 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm44694-201ENSMUST00000205317 1298 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm44703-201ENSMUST00000205724 248 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Gm44521-201ENSMUST00000206469 217 ntBASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col6a6Q8C6K9 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm22556-201ENSMUST00000157803 100 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm44083-201ENSMUST00000203114 337 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 AF357341-201ENSMUST00000083088 75 ntBASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a6Q8C6K9 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col6a6Q8C6K9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.09□□□□□ -2.08
Col6a6Q8C6K9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Col6a6Q8C6K9 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col6a6Q8C6K9 Gm25068-201ENSMUST00000103895 110 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm16111-201ENSMUST00000162128 285 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm27443-201ENSMUST00000184660 98 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm6615-201ENSMUST00000199426 631 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm45078-201ENSMUST00000205343 546 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm15933-201ENSMUST00000117215 616 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm6444-201ENSMUST00000119611 458 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm6565-201ENSMUST00000121217 438 ntBASIC2.08□□□□□ -2.08
Col6a6Q8C6K9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms