Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm17155-201ENSMUST00000165969 473 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Mir6391-201ENSMUST00000184391 104 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm28623-201ENSMUST00000187219 192 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm36259-201ENSMUST00000197340 392 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm44720-201ENSMUST00000206076 260 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm9309-201ENSMUST00000223537 546 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm22810-201ENSMUST00000082741 158 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Gm26206-201ENSMUST00000082908 110 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Snora70-201ENSMUST00000083047 137 ntBASIC3.31□□□□□ -1.88
Tsen54Q8C2A2 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm14785-201ENSMUST00000120185 539 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm14916-201ENSMUST00000121904 204 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm16274-201ENSMUST00000139251 592 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm26348-201ENSMUST00000157528 240 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm22726-201ENSMUST00000158089 179 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm26701-201ENSMUST00000181571 234 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm26960-201ENSMUST00000182263 412 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm29576-201ENSMUST00000188020 678 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Npn2-202ENSMUST00000189275 235 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm28354-201ENSMUST00000190904 678 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm29950-201ENSMUST00000195273 237 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm43652-201ENSMUST00000196219 675 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm45614-201ENSMUST00000209994 721 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm45523-201ENSMUST00000210712 799 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm2628-201ENSMUST00000218019 426 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm18921-201ENSMUST00000221798 366 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm23503-201ENSMUST00000083903 107 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Tsen54Q8C2A2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Mir761-201ENSMUST00000103245 76 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm23697-201ENSMUST00000103897 110 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm22771-201ENSMUST00000104449 91 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm11874-201ENSMUST00000117437 130 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm11698-201ENSMUST00000117948 455 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm13602-201ENSMUST00000122405 493 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm25605-201ENSMUST00000158364 124 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm22908-201ENSMUST00000177620 110 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Mir6943-201ENSMUST00000185186 66 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm28146-201ENSMUST00000185517 701 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm43814-201ENSMUST00000197851 413 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm5551-201ENSMUST00000199720 690 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm43026-201ENSMUST00000202972 325 ntBASIC3.29□□□□□ -1.88
Tsen54Q8C2A2 Gm45023-201ENSMUST00000207951 379 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms