Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm34779-201ENSMUST00000210036 263 ntBASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ccdc40Q8BI79 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm25728-201ENSMUST00000104525 159 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm16431-201ENSMUST00000117454 431 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm15038-201ENSMUST00000122144 296 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm23886-201ENSMUST00000122684 313 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm23755-201ENSMUST00000157578 343 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm25427-201ENSMUST00000157605 103 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm27033-201ENSMUST00000183226 544 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm43224-201ENSMUST00000201567 898 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm44720-201ENSMUST00000206076 260 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Gm25630-201ENSMUST00000084000 162 ntBASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ccdc40Q8BI79 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm13167-201ENSMUST00000118554 578 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm7308-201ENSMUST00000121087 447 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm27592-201ENSMUST00000157729 126 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm24745-201ENSMUST00000157840 85 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm22174-201ENSMUST00000175050 125 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm22692-201ENSMUST00000175055 125 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm27634-201ENSMUST00000175060 126 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm22460-201ENSMUST00000175269 124 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm25535-201ENSMUST00000175364 125 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm24365-201ENSMUST00000175384 125 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm44310-201ENSMUST00000175424 126 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm22639-201ENSMUST00000175591 125 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm24979-201ENSMUST00000178626 126 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm4479-201ENSMUST00000178807 171 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm27743-201ENSMUST00000185136 126 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm37979-201ENSMUST00000193065 712 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm38053-201ENSMUST00000193938 160 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm43228-201ENSMUST00000200735 264 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm19219-201ENSMUST00000215863 724 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm18388-201ENSMUST00000222339 557 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm21286-201ENSMUST00000098035 545 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc40Q8BI79 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc40Q8BI79 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms