Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm29268-201ENSMUST00000188669 615 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm28978-201ENSMUST00000191120 615 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm37172-201ENSMUST00000191926 615 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm38107-201ENSMUST00000194873 696 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm44811-201ENSMUST00000209120 228 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm22061-201ENSMUST00000082557 107 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.13□□□□□ -1.59
Ubp1Q811S7 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ubp1Q811S7 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm25595-201ENSMUST00000102273 97 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm14940-201ENSMUST00000119309 495 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm11804-201ENSMUST00000121663 468 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm13077-201ENSMUST00000121941 484 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Mir3110-201ENSMUST00000175053 80 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm10784-201ENSMUST00000178715 238 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Mir7235-201ENSMUST00000183796 56 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Mir6481-201ENSMUST00000184617 110 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm27781-201ENSMUST00000185185 92 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm29429-201ENSMUST00000187071 121 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm45005-201ENSMUST00000206640 157 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18468-201ENSMUST00000207321 369 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18470-201ENSMUST00000207467 420 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18465-201ENSMUST00000207468 369 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18464-201ENSMUST00000207803 420 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm44871-201ENSMUST00000207821 497 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18458-201ENSMUST00000207908 369 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm18461-201ENSMUST00000208421 420 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm24042-201ENSMUST00000083114 103 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.12□□□□□ -1.59
Ubp1Q811S7 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Ubp1Q811S7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm24235-201ENSMUST00000104319 129 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm25565-201ENSMUST00000104605 105 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm25906-201ENSMUST00000158489 126 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm23704-201ENSMUST00000158844 340 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm25956-201ENSMUST00000175115 217 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm27245-201ENSMUST00000184385 376 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm8719-201ENSMUST00000203602 534 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm45616-201ENSMUST00000211711 319 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 AC153864.2-201ENSMUST00000220424 292 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Mir337-201ENSMUST00000083592 97 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Ubp1Q811S7 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.11□□□□□ -1.59
Ubp1Q811S7 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms