Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm23948-201ENSMUST00000104030 132 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm24784-201ENSMUST00000157640 62 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm22312-201ENSMUST00000158005 130 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm23660-201ENSMUST00000178362 79 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm24088-201ENSMUST00000179100 79 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm24464-201ENSMUST00000179697 107 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Mir7031-201ENSMUST00000183860 65 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm8600-201ENSMUST00000186320 905 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm42621-201ENSMUST00000198114 275 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Mir3970-201ENSMUST00000199287 90 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm17989-201ENSMUST00000211543 412 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm17779-201ENSMUST00000213395 394 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim56Q80VI1 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.34□□□□□ -1.55
Trim56Q80VI1 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim56Q80VI1 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.34□□□□□ -1.56
Trim56Q80VI1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
Trim56Q80VI1 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm22657-201ENSMUST00000104197 132 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm14765-201ENSMUST00000121954 326 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm25058-201ENSMUST00000157365 128 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm23496-201ENSMUST00000157741 248 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm25184-201ENSMUST00000157753 163 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm17183-201ENSMUST00000171170 493 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Mir6393-201ENSMUST00000183709 94 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm27875-201ENSMUST00000184425 123 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm9443-201ENSMUST00000188406 816 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm42643-201ENSMUST00000200504 279 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Gm8319-201ENSMUST00000205708 641 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 Snord68-201ENSMUST00000082516 86 ntBASIC5.33□□□□□ -1.56
Trim56Q80VI1 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim56Q80VI1 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm15603-201ENSMUST00000119252 492 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm12564-201ENSMUST00000119860 321 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm23463-201ENSMUST00000122468 99 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm23906-201ENSMUST00000157573 128 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm23411-201ENSMUST00000157988 62 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm26354-201ENSMUST00000158221 129 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm23855-201ENSMUST00000158377 135 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm24100-201ENSMUST00000178592 79 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm24713-201ENSMUST00000178850 107 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm26180-201ENSMUST00000179942 107 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm24137-201ENSMUST00000180055 79 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm25448-201ENSMUST00000180065 107 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm22391-201ENSMUST00000180356 79 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm37601-201ENSMUST00000194922 394 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm37836-201ENSMUST00000195875 175 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm43407-201ENSMUST00000199816 317 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm43039-201ENSMUST00000202883 963 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm6012-201ENSMUST00000210821 730 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Gm23455-201ENSMUST00000083331 100 ntBASIC5.32□□□□□ -1.56
Trim56Q80VI1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim56Q80VI1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms