Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14570-201ENSMUST00000119444 391 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm13213-201ENSMUST00000119668 474 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm11830-201ENSMUST00000120175 561 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22718-201ENSMUST00000122701 315 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23121-201ENSMUST00000157653 173 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm26354-201ENSMUST00000158221 129 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23700-201ENSMUST00000158842 102 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm4222-201ENSMUST00000165784 470 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Mir3112-201ENSMUST00000175431 82 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm8807-201ENSMUST00000179328 492 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm6075-201ENSMUST00000186816 486 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm17954-201ENSMUST00000195893 607 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm42990-201ENSMUST00000199231 312 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm44157-201ENSMUST00000204720 410 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm44543-201ENSMUST00000209136 396 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sh3rf1Q69ZI1 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm15526-201ENSMUST00000112504 204 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm14823-201ENSMUST00000117698 238 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm16128-201ENSMUST00000117855 626 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm15844-201ENSMUST00000118016 576 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm14792-201ENSMUST00000119725 258 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22870-201ENSMUST00000157501 112 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23078-201ENSMUST00000157848 148 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm25865-201ENSMUST00000158247 104 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm24001-201ENSMUST00000158463 85 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm27521-201ENSMUST00000184022 64 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm27747-201ENSMUST00000184707 85 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm37338-201ENSMUST00000191986 127 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm19177-201ENSMUST00000204520 613 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm44609-201ENSMUST00000207157 460 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm8745-201ENSMUST00000207846 782 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm10038-201ENSMUST00000077233 441 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23972-201ENSMUST00000083322 165 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm26329-201ENSMUST00000093723 110 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.96□□□□□ -1.61
Sh3rf1Q69ZI1 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm23879-201ENSMUST00000116874 126 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm13321-201ENSMUST00000117101 400 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm15670-201ENSMUST00000117740 447 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm13677-201ENSMUST00000120739 595 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm12422-201ENSMUST00000121431 302 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm16345-201ENSMUST00000146065 158 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm23179-201ENSMUST00000158693 304 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm27928-201ENSMUST00000183747 256 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm27254-201ENSMUST00000183926 517 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm19498-201ENSMUST00000191128 331 ntBASIC4.96□□□□□ -1.62
Sh3rf1Q69ZI1 Gm38098-201ENSMUST00000194115 241 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms