Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Trim28Q62318 Mir759-201ENSMUST00000103254 98 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm13664-201ENSMUST00000117304 345 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm13831-201ENSMUST00000118764 302 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm15926-201ENSMUST00000120492 550 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm24244-201ENSMUST00000157317 130 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Gm20693-201ENSMUST00000177431 211 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim28Q62318 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Gm43652-201ENSMUST00000196219 675 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm22897-201ENSMUST00000197860 128 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim28Q62318 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm43892-201ENSMUST00000204373 265 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim28Q62318 Gm19599-201ENSMUST00000218898 358 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm25079-201ENSMUST00000082529 203 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm23975-201ENSMUST00000082685 106 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm23677-201ENSMUST00000083156 104 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm21286-201ENSMUST00000098035 545 ntBASIC5.02□□□□□ -1.61
Trim28Q62318 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim28Q62318 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim28Q62318 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm22472-201ENSMUST00000104115 134 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm14793-201ENSMUST00000118739 311 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm11829-201ENSMUST00000121003 282 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim28Q62318 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm28016-201ENSMUST00000184594 196 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim28Q62318 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm37343-201ENSMUST00000192542 111 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm19147-201ENSMUST00000199622 652 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm7041-201ENSMUST00000201227 524 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Gm7692-201ENSMUST00000213534 409 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr936-202ENSMUST00000216912 937 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 AC125379.1-201ENSMUST00000221928 111 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim28Q62318 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim28Q62318 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.01□□□□□ -1.61
Trim28Q62318 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim28Q62318 Gm336-201ENSMUST00000186376 1480 ntBASIC5□□□□□ -1.61
Trim28Q62318 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim28Q62318 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim28Q62318 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim28Q62318 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim28Q62318 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim28Q62318 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim28Q62318 Gm25316-201ENSMUST00000116826 118 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm15087-201ENSMUST00000117465 1172 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm12261-201ENSMUST00000117499 645 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm13439-201ENSMUST00000117541 409 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm15399-201ENSMUST00000118055 724 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm24847-201ENSMUST00000158032 108 ntBASIC5□□□□□ -1.61
Trim28Q62318 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Trim28Q62318 Gm25525-201ENSMUST00000177701 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm26178-201ENSMUST00000177706 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm26465-201ENSMUST00000178517 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm24317-201ENSMUST00000178536 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm25021-201ENSMUST00000179184 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm22995-201ENSMUST00000179670 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm24424-201ENSMUST00000179714 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm24389-201ENSMUST00000179962 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm25672-201ENSMUST00000180111 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Mir6418-201ENSMUST00000185075 115 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm19637-201ENSMUST00000185933 579 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm29163-201ENSMUST00000188029 107 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm28924-201ENSMUST00000190012 241 ntBASIC5□□□□□ -1.61
Trim28Q62318 Trbv8-201ENSMUST00000194020 285 ntBASIC5□□□□□ -1.61
Trim28Q62318 Gm37119-201ENSMUST00000195691 389 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms