Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cln3Q61124 Gm5558-201ENSMUST00000178933 495 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm27820-201ENSMUST00000183628 175 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm20257-202ENSMUST00000188643 130 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm34073-201ENSMUST00000195736 212 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.59□□□□□ -1.51
Cln3Q61124 Gm7407-201ENSMUST00000208301 568 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm19096-201ENSMUST00000209705 766 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cln3Q61124 AC241593.1-201ENSMUST00000224768 397 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.59□□□□□ -1.51
Cln3Q61124 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cln3Q61124 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cln3Q61124 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Cln3Q61124 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cln3Q61124 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm11196-201ENSMUST00000119052 395 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm25390-201ENSMUST00000157341 103 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm22059-201ENSMUST00000157544 104 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm16114-201ENSMUST00000161930 300 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm21999-201ENSMUST00000165985 387 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm17153-201ENSMUST00000171314 490 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm16378-201ENSMUST00000179168 342 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Mir6346-201ENSMUST00000183982 81 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Mir6926-201ENSMUST00000184562 68 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm8719-201ENSMUST00000203602 534 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.58□□□□□ -1.52
Cln3Q61124 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm5265-201ENSMUST00000076828 342 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cln3Q61124 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Cln3Q61124 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cln3Q61124 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Cln3Q61124 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.57□□□□□ -1.52
Cln3Q61124 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Cln3Q61124 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm23000-201ENSMUST00000157083 139 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm24441-201ENSMUST00000157235 281 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm26098-201ENSMUST00000157247 288 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm25920-201ENSMUST00000158307 99 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm24676-201ENSMUST00000158758 75 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm10075-201ENSMUST00000162030 545 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm27233-201ENSMUST00000184030 307 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm27781-201ENSMUST00000185185 92 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm29781-201ENSMUST00000203862 478 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm44446-201ENSMUST00000204864 255 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 CT954323.1-201ENSMUST00000222774 229 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 AC165138.1-201ENSMUST00000226984 270 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Gm26330-201ENSMUST00000082817 104 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.57□□□□□ -1.52
Cln3Q61124 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cln3Q61124 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cln3Q61124 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cln3Q61124 Gm8935-202ENSMUST00000105727 1959 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cln3Q61124 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.56□□□□□ -1.52
Cln3Q61124 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cln3Q61124 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Cln3Q61124 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cln3Q61124 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.56□□□□□ -1.52
Cln3Q61124 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cln3Q61124 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cln3Q61124 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms