Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col12a1Q60847 Gm25581-201ENSMUST00000083410 164 ntBASIC2.28□□□□□ -2.04
Col12a1Q60847 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm11344-201ENSMUST00000122011 335 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm3030-201ENSMUST00000163410 516 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm37162-201ENSMUST00000191708 551 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm45678-201ENSMUST00000210509 295 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col12a1Q60847 BC022960-201ENSMUST00000119987 1815 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col12a1Q60847 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Col12a1Q60847 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Gm22806-201ENSMUST00000082738 136 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC2.27□□□□□ -2.05
Col12a1Q60847 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col12a1Q60847 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col12a1Q60847 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm14794-201ENSMUST00000118181 192 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Mir6352-201ENSMUST00000184495 116 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm29356-201ENSMUST00000186935 373 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.26□□□□□ -2.05
Col12a1Q60847 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm4263-202ENSMUST00000221392 667 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm7984-201ENSMUST00000060640 538 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm28794-201ENSMUST00000185276 136 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm44343-201ENSMUST00000196702 90 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Col12a1Q60847 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col12a1Q60847 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm25807-201ENSMUST00000122783 305 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm23179-201ENSMUST00000158693 304 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm28975-201ENSMUST00000186412 686 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm38330-201ENSMUST00000192743 959 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.26□□□□□ -2.05
Col12a1Q60847 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.26□□□□□ -2.05
Col12a1Q60847 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Col12a1Q60847 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
Col12a1Q60847 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col12a1Q60847 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col12a1Q60847 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col12a1Q60847 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm12495-201ENSMUST00000119750 447 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm27648-201ENSMUST00000184315 107 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm15421-202ENSMUST00000118224 399 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Trbv22-201ENSMUST00000191697 291 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm6615-201ENSMUST00000199426 631 ntBASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col12a1Q60847 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Col12a1Q60847 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm12814-201ENSMUST00000117091 846 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm25044-201ENSMUST00000158603 104 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.24□□□□□ -2.05
Col12a1Q60847 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Gm26449-201ENSMUST00000082452 104 ntBASIC2.24□□□□□ -2.05
Col12a1Q60847 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col12a1Q60847 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Col12a1Q60847 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col12a1Q60847 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col12a1Q60847 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm44849-201ENSMUST00000207595 484 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm45778-201ENSMUST00000211959 153 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm14957-201ENSMUST00000121069 817 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.23□□□□□ -2.05
Col12a1Q60847 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.23□□□□□ -2.05
Col12a1Q60847 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms