Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm5384-201ENSMUST00000120313 463 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm7327-201ENSMUST00000120925 652 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm44308-201ENSMUST00000197080 99 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm43922-201ENSMUST00000205071 328 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm45879-201ENSMUST00000212521 392 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm22622-201ENSMUST00000082870 129 ntBASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm15536-201ENSMUST00000121411 114 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm23585-201ENSMUST00000157656 102 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Mir7013-201ENSMUST00000183540 72 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm29552-201ENSMUST00000190548 660 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm44212-201ENSMUST00000205016 897 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm9762-201ENSMUST00000036976 444 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.08□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm23152-201ENSMUST00000175322 116 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm27220-201ENSMUST00000183453 262 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm3496-201ENSMUST00000188283 745 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm9696-202ENSMUST00000191541 830 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm9377-201ENSMUST00000207227 623 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm6796-201ENSMUST00000211919 243 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm13751-201ENSMUST00000120280 752 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm24601-201ENSMUST00000157970 143 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm43704-201ENSMUST00000196164 496 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc88aQ5SNZ0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Mir7242-201ENSMUST00000183710 79 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.06□□□□□ -1.92
Ccdc88aQ5SNZ0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm14877-201ENSMUST00000119803 478 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Snord53-201ENSMUST00000175146 78 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm22264-201ENSMUST00000178200 107 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm26622-201ENSMUST00000180520 298 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Mir8116-201ENSMUST00000184134 97 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Mir7226-201ENSMUST00000184953 60 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm44487-201ENSMUST00000205145 325 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm30674-201ENSMUST00000214523 392 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm23738-201ENSMUST00000082828 171 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm25377-201ENSMUST00000104334 129 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Snora36b-201ENSMUST00000104383 132 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm23441-201ENSMUST00000157268 127 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Snora81-201ENSMUST00000157310 178 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Mir3106-201ENSMUST00000175401 82 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm27952-201ENSMUST00000184748 105 ntBASIC3.05□□□□□ -1.92
Ccdc88aQ5SNZ0 Gm37934-201ENSMUST00000192902 402 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms