Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm24319-201ENSMUST00000083389 107 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.15□□□□□ -2.06
Trav6d-4Q5R1I0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm22782-201ENSMUST00000104082 132 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm9850-201ENSMUST00000117916 227 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm11471-201ENSMUST00000121824 198 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm24534-201ENSMUST00000157949 291 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm17194-201ENSMUST00000164610 348 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm9613-201ENSMUST00000171662 196 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm24816-201ENSMUST00000175311 151 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm20656-201ENSMUST00000176925 518 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Gm28923-201ENSMUST00000187755 322 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm22936-201ENSMUST00000103955 126 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm13574-201ENSMUST00000120482 394 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm25807-201ENSMUST00000122783 305 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm22500-201ENSMUST00000158982 99 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm17030-201ENSMUST00000167016 393 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm25470-201ENSMUST00000175576 111 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm43355-201ENSMUST00000196541 346 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm44425-201ENSMUST00000203739 429 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm18193-201ENSMUST00000210017 772 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm45551-201ENSMUST00000211459 928 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm26494-201ENSMUST00000083154 143 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm24493-201ENSMUST00000083805 143 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav6d-4Q5R1I0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm22674-201ENSMUST00000104413 131 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm16171-201ENSMUST00000118004 324 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm11285-201ENSMUST00000118443 322 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm16017-201ENSMUST00000119834 208 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm14463-201ENSMUST00000121117 498 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm16232-201ENSMUST00000162856 167 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm44966-201ENSMUST00000208096 157 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm10088-201ENSMUST00000074116 423 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.13□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trav6d-4Q5R1I0 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.12□□□□□ -2.07
Trav6d-4Q5R1I0 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms