Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm14107-201ENSMUST00000117774 330 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm13396-201ENSMUST00000120617 271 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm23759-201ENSMUST00000158351 268 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm26005-201ENSMUST00000158802 134 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm44825-201ENSMUST00000207557 150 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm44598-201ENSMUST00000207566 150 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm18462-201ENSMUST00000208112 417 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 CT954323.1-201ENSMUST00000222774 229 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Gm42955-201ENSMUST00000197355 3393 ntBASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim41Q5NCC3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm27047-201ENSMUST00000183072 1819 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm12677-201ENSMUST00000118668 426 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm14566-201ENSMUST00000118915 321 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm14841-201ENSMUST00000121067 758 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm23209-201ENSMUST00000158667 110 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm24175-201ENSMUST00000158931 129 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm27688-201ENSMUST00000183634 91 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm28163-201ENSMUST00000187099 325 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm29884-201ENSMUST00000218403 453 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 AC163357.1-201ENSMUST00000220847 233 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 AC165092.2-201ENSMUST00000224681 368 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Gm43386-201ENSMUST00000199654 4001 ntBASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim41Q5NCC3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm37509-201ENSMUST00000194867 3169 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm43130-201ENSMUST00000197721 3907 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm45222-201ENSMUST00000207029 4307 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm24120-201ENSMUST00000103978 129 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm22145-201ENSMUST00000157396 148 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm23354-201ENSMUST00000158426 104 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm22177-201ENSMUST00000175002 158 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm9775-201ENSMUST00000189402 331 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm2497-201ENSMUST00000189539 601 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm32308-201ENSMUST00000203053 280 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 AC158633.1-201ENSMUST00000219892 649 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Gm37400-201ENSMUST00000193148 3605 ntBASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim41Q5NCC3 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm12285-201ENSMUST00000117347 233 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm14971-201ENSMUST00000117980 663 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm14591-201ENSMUST00000120407 518 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm11584-201ENSMUST00000120636 325 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm26279-201ENSMUST00000157095 102 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm7329-201ENSMUST00000185915 210 ntBASIC8.85□□□□□ -0.99
Trim41Q5NCC3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms