Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm23271-201ENSMUST00000104052 124 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm12509-201ENSMUST00000118033 609 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm16445-201ENSMUST00000120399 714 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm12543-201ENSMUST00000120410 543 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm5646-201ENSMUST00000120568 714 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm23183-201ENSMUST00000122595 323 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm16363-201ENSMUST00000132460 877 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm26148-201ENSMUST00000157430 68 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm24520-201ENSMUST00000179510 110 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm26746-201ENSMUST00000181722 487 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Mir6960-201ENSMUST00000183449 61 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm28615-201ENSMUST00000187527 482 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm37428-201ENSMUST00000193886 137 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm43115-201ENSMUST00000196244 160 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm42828-201ENSMUST00000199669 469 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm44135-201ENSMUST00000205221 368 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm6842-201ENSMUST00000211361 390 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm18120-201ENSMUST00000220079 511 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trim40Q3UWA4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm26002-201ENSMUST00000101915 107 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm22272-201ENSMUST00000104039 134 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm25765-201ENSMUST00000104100 132 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm11393-201ENSMUST00000118019 288 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm14008-201ENSMUST00000120483 274 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm22561-201ENSMUST00000157331 84 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm23592-201ENSMUST00000157859 117 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm3102-201ENSMUST00000164236 489 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm17064-201ENSMUST00000167690 452 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm20399-201ENSMUST00000174652 132 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm5473-201ENSMUST00000179326 642 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm10292-201ENSMUST00000183142 581 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm19224-201ENSMUST00000190477 793 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm35212-201ENSMUST00000196672 606 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm44212-201ENSMUST00000205016 897 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm44852-201ENSMUST00000207950 369 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm29817-201ENSMUST00000210098 172 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm45742-201ENSMUST00000212400 433 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm18252-203ENSMUST00000215855 757 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm18026-201ENSMUST00000222789 727 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim40Q3UWA4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.25□□□□□ -1.89
Trim40Q3UWA4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms