Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm11704-201ENSMUST00000120031 214 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm12412-201ENSMUST00000121867 328 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm16331-201ENSMUST00000144274 498 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm22310-201ENSMUST00000157509 116 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm25555-201ENSMUST00000158078 111 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm18522-201ENSMUST00000173947 650 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm21754-201ENSMUST00000177550 479 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm23619-201ENSMUST00000178411 94 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm25474-201ENSMUST00000179052 94 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm22047-201ENSMUST00000179176 94 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm27957-201ENSMUST00000184054 127 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm28802-201ENSMUST00000188624 944 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm2628-201ENSMUST00000218019 426 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 AC124489.2-201ENSMUST00000223930 589 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 AC129308.2-201ENSMUST00000224588 789 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm37064-201ENSMUST00000193851 2231 ntBASIC5□□□□□ -1.61
Ddb1Q3U1J4 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ddb1Q3U1J4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm13614-201ENSMUST00000117306 503 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm16274-201ENSMUST00000139251 592 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm11281-201ENSMUST00000141391 576 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm25559-201ENSMUST00000157182 74 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm23602-201ENSMUST00000157258 132 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm15946-201ENSMUST00000160654 423 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm19457-201ENSMUST00000200995 448 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm43892-201ENSMUST00000204373 265 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm44961-201ENSMUST00000207450 196 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm44600-201ENSMUST00000208540 111 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm18113-201ENSMUST00000220630 303 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ddb1Q3U1J4 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm23532-201ENSMUST00000104569 112 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm12370-201ENSMUST00000117809 604 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm15060-201ENSMUST00000119550 948 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm22208-201ENSMUST00000122658 110 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm3470-201ENSMUST00000160819 420 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm20415-201ENSMUST00000172877 423 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm22166-201ENSMUST00000178419 121 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm23288-201ENSMUST00000179213 121 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Mir6393-201ENSMUST00000183709 94 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm6075-201ENSMUST00000186816 486 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm20885-201ENSMUST00000190192 654 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm29740-201ENSMUST00000193182 655 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm36866-201ENSMUST00000193343 657 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm36047-201ENSMUST00000193659 657 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm20857-201ENSMUST00000194766 657 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm20858-201ENSMUST00000195459 657 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm43217-201ENSMUST00000199513 367 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm18194-201ENSMUST00000210455 481 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm25800-201ENSMUST00000082636 134 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Gm25480-201ENSMUST00000083217 133 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 Mir30e-201ENSMUST00000083475 92 ntBASIC4.98□□□□□ -1.61
Ddb1Q3U1J4 AF357428-201ENSMUST00000083815 69 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms