Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm22498-201ENSMUST00000104497 86 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Mir105-201ENSMUST00000104655 80 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Mir208b-201ENSMUST00000104735 77 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm15206-201ENSMUST00000119143 454 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm24905-201ENSMUST00000158129 104 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm26352-201ENSMUST00000158223 125 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm8161-201ENSMUST00000168739 481 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm26177-201ENSMUST00000178683 107 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm23144-201ENSMUST00000180226 107 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Mir6960-201ENSMUST00000183449 61 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm10105-201ENSMUST00000184601 270 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Mir6481-201ENSMUST00000184617 110 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm27414-201ENSMUST00000185033 381 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Npn2-202ENSMUST00000189275 235 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm29097-201ENSMUST00000190273 422 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm42621-201ENSMUST00000198114 275 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm43083-201ENSMUST00000199594 476 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm45590-201ENSMUST00000209715 262 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm35262-201ENSMUST00000215133 267 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm6988-201ENSMUST00000222676 375 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm23515-201ENSMUST00000082829 107 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm22423-201ENSMUST00000082861 184 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Olfr203-201ENSMUST00000089305 924 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm14125-201ENSMUST00000113442 680 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm14628-201ENSMUST00000117508 635 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm12571-201ENSMUST00000118132 243 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm13085-201ENSMUST00000118356 171 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm15177-201ENSMUST00000120491 577 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm14761-201ENSMUST00000121363 262 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm23214-201ENSMUST00000122716 157 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm7846-201ENSMUST00000145844 274 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm24251-201ENSMUST00000157324 114 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm27690-201ENSMUST00000184596 126 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm28666-201ENSMUST00000186649 274 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm42475-201ENSMUST00000201212 295 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm45007-201ENSMUST00000206237 366 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm44870-201ENSMUST00000207291 357 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Mir346-201ENSMUST00000083547 98 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm4017-201ENSMUST00000084813 338 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Usp39Q3TIX9 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm12311-201ENSMUST00000118803 374 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm14303-201ENSMUST00000121320 171 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm22968-201ENSMUST00000157955 118 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm3470-201ENSMUST00000160819 420 ntBASIC4.29□□□□□ -1.72
Usp39Q3TIX9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms