Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm22294-201ENSMUST00000083308 104 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.7□□□□□ -1.5
Col9a1Q05722 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col9a1Q05722 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col9a1Q05722 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm16250-201ENSMUST00000148974 256 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm24015-201ENSMUST00000157725 232 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm16404-201ENSMUST00000177739 468 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm6660-201ENSMUST00000179149 468 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm14598-201ENSMUST00000180109 468 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm14625-201ENSMUST00000180231 468 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm19427-201ENSMUST00000183619 208 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm27535-201ENSMUST00000183814 157 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm28683-201ENSMUST00000187134 615 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm28840-205ENSMUST00000189320 615 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm28835-203ENSMUST00000190062 615 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm7182-201ENSMUST00000193351 732 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm24200-201ENSMUST00000082955 157 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col9a1Q05722 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.69□□□□□ -1.5
Col9a1Q05722 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Col9a1Q05722 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm42482-201ENSMUST00000198904 1947 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm24951-201ENSMUST00000102182 109 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm24172-201ENSMUST00000104127 117 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm23902-201ENSMUST00000157571 134 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm22654-201ENSMUST00000157874 105 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm24537-201ENSMUST00000157950 102 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Mir6414-201ENSMUST00000183685 82 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm28389-201ENSMUST00000190090 697 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm8599-201ENSMUST00000193033 457 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm43408-201ENSMUST00000198263 440 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm43436-201ENSMUST00000199308 147 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 Gm8820-201ENSMUST00000204077 571 ntBASIC5.68□□□□□ -1.5
Col9a1Q05722 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms