Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm12261-201ENSMUST00000117499 645 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm13172-201ENSMUST00000118685 256 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm14067-201ENSMUST00000119340 314 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm13787-201ENSMUST00000120422 168 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm11229-201ENSMUST00000121993 437 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm24251-201ENSMUST00000157324 114 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm24439-201ENSMUST00000157894 117 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm24818-201ENSMUST00000175093 161 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm11395-201ENSMUST00000181011 499 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm11394-201ENSMUST00000181421 517 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm28872-201ENSMUST00000191518 158 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm37682-201ENSMUST00000191776 522 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm42694-201ENSMUST00000196951 358 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm45365-201ENSMUST00000209489 256 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm45614-201ENSMUST00000209994 721 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm9318-201ENSMUST00000222444 438 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm26225-201ENSMUST00000082508 135 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a1Q04857 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a1Q04857 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm11673-201ENSMUST00000117846 331 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm11506-201ENSMUST00000122414 470 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm25923-201ENSMUST00000158312 138 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm25362-201ENSMUST00000158854 105 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm26180-201ENSMUST00000179942 107 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm44336-201ENSMUST00000203696 468 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm44871-201ENSMUST00000207821 497 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm45367-201ENSMUST00000210171 347 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm18016-201ENSMUST00000216119 801 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm25792-201ENSMUST00000083289 100 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm10222-201ENSMUST00000088336 294 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.23□□□□□ -1.57
Col6a1Q04857 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Col6a1Q04857 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Col6a1Q04857 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Mir879-201ENSMUST00000104703 76 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm12255-201ENSMUST00000117184 284 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm13378-201ENSMUST00000117483 336 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm15994-201ENSMUST00000118029 402 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm12815-201ENSMUST00000121737 135 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm14578-201ENSMUST00000122166 391 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm25058-201ENSMUST00000157365 128 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm23318-201ENSMUST00000158000 108 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm26404-201ENSMUST00000158498 109 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm25156-201ENSMUST00000179809 79 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm23523-201ENSMUST00000180190 107 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a1Q04857 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.22□□□□□ -1.57
Col6a1Q04857 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Gm26330-201ENSMUST00000082817 104 ntBASIC5.22□□□□□ -1.57
Col6a1Q04857 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Col6a1Q04857 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms