Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sox1P53783 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sox1P53783 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sox1P53783 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.05□□□□□ -1.6
Sox1P53783 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.05□□□□□ -1.6
Sox1P53783 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.04□□□□□ -1.6
Sox1P53783 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Sox1P53783 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.04□□□□□ -1.6
Sox1P53783 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sox1P53783 Gm22936-201ENSMUST00000103955 126 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Snord98-201ENSMUST00000116819 65 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm12771-201ENSMUST00000120246 135 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm11679-201ENSMUST00000121830 779 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.04□□□□□ -1.6
Sox1P53783 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.04□□□□□ -1.6
Sox1P53783 Gm12226-201ENSMUST00000144172 876 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm22816-201ENSMUST00000157450 117 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm25572-201ENSMUST00000157527 172 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm23262-201ENSMUST00000158323 168 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm22435-201ENSMUST00000158552 128 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm24553-201ENSMUST00000158653 131 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm26400-201ENSMUST00000175012 85 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm37128-201ENSMUST00000192599 232 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.04□□□□□ -1.6
Sox1P53783 Gm6059-201ENSMUST00000196903 340 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm5750-201ENSMUST00000218711 801 ntBASIC5.04□□□□□ -1.6
Sox1P53783 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm33654-201ENSMUST00000221704 215 ntBASIC5.04□□□□□ -1.6
Sox1P53783 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.04□□□□□ -1.6
Sox1P53783 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm25260-201ENSMUST00000083053 134 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Snora30-201ENSMUST00000083325 130 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Sox1P53783 Gm381-201ENSMUST00000117443 2037 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.04□□□□□ -1.6
Sox1P53783 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sox1P53783 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Mir551b-201ENSMUST00000102165 98 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm25560-201ENSMUST00000104606 176 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm15844-201ENSMUST00000118016 576 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm12423-201ENSMUST00000118334 135 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm24251-201ENSMUST00000157324 114 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm25923-201ENSMUST00000158312 138 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm26189-201ENSMUST00000179879 107 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm9022-202ENSMUST00000183285 483 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm27528-201ENSMUST00000183544 205 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Mir6408-201ENSMUST00000183643 91 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm29334-201ENSMUST00000190334 357 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm29475-201ENSMUST00000190767 312 ntBASIC5.03□□□□□ -1.6
Sox1P53783 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Gm42665-201ENSMUST00000202100 586 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.03□□□□□ -1.6
Sox1P53783 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm23721-201ENSMUST00000083005 107 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm26164-201ENSMUST00000083793 104 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Smc5-206ENSMUST00000226111 3265 ntBASIC5.03□□□□□ -1.6
Sox1P53783 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.03□□□□□ -1.6
Sox1P53783 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox1P53783 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox1P53783 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox1P53783 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.02□□□□□ -1.61
Sox1P53783 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox1P53783 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms