Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Usp4P35123 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Usp4P35123 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.71□□□□□ -1.65
Usp4P35123 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Mir147-201ENSMUST00000102354 79 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm23709-201ENSMUST00000104364 130 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm12806-201ENSMUST00000119384 268 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm14919-201ENSMUST00000120839 390 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm4852-201ENSMUST00000121202 729 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm7840-201ENSMUST00000122086 533 ntBASIC4.71□□□□□ -1.66
Usp4P35123 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Gm25827-201ENSMUST00000157089 107 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm26034-201ENSMUST00000158154 116 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Usp4P35123 Gm8532-201ENSMUST00000179174 461 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp4P35123 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp4P35123 Gm10105-201ENSMUST00000184601 270 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm27286-201ENSMUST00000184934 179 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm28781-201ENSMUST00000185760 696 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm29307-201ENSMUST00000187367 696 ntBASIC4.71□□□□□ -1.66
Usp4P35123 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Gm29339-201ENSMUST00000189613 696 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm29407-201ENSMUST00000191468 696 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm19147-201ENSMUST00000199622 652 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm45438-201ENSMUST00000210242 564 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp4P35123 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Gm7692-201ENSMUST00000213534 409 ntBASIC4.71□□□□□ -1.66
Usp4P35123 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm46193-201ENSMUST00000219399 364 ntBASIC4.71□□□□□ -1.66
Usp4P35123 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.71□□□□□ -1.66
Usp4P35123 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.71□□□□□ -1.66
Usp4P35123 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.71□□□□□ -1.66
Usp4P35123 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp4P35123 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp4P35123 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Usp4P35123 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Usp4P35123 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Usp4P35123 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Usp4P35123 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm14897-201ENSMUST00000118213 207 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm9059-201ENSMUST00000118319 183 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm14469-201ENSMUST00000118363 202 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm24439-201ENSMUST00000157894 117 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm25243-201ENSMUST00000174912 207 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm22177-201ENSMUST00000175002 158 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm20656-201ENSMUST00000176925 518 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm22290-201ENSMUST00000177655 107 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm22583-201ENSMUST00000178031 107 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm21978-201ENSMUST00000179696 377 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm27254-201ENSMUST00000183926 517 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm29031-201ENSMUST00000185316 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm29000-201ENSMUST00000185444 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm28204-201ENSMUST00000185934 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm28290-201ENSMUST00000186505 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm28161-201ENSMUST00000186669 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm18505-201ENSMUST00000187360 790 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 Gm28749-209ENSMUST00000189599 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm28069-201ENSMUST00000189926 214 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm7858-201ENSMUST00000190177 622 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm33163-201ENSMUST00000194504 614 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm5552-201ENSMUST00000197149 515 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.7□□□□□ -1.66
Usp4P35123 Gm43083-201ENSMUST00000199594 476 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm19366-201ENSMUST00000206996 156 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.7□□□□□ -1.66
Usp4P35123 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.7□□□□□ -1.66
Usp4P35123 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.7□□□□□ -1.66
Usp4P35123 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.7□□□□□ -1.66
Usp4P35123 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp4P35123 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp4P35123 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Usp4P35123 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Usp4P35123 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.7□□□□□ -1.66
Usp4P35123 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms