Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm22575-201ENSMUST00000082981 110 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Mir350-201ENSMUST00000083639 99 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Gm23766-201ENSMUST00000103894 80 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Gm14229-201ENSMUST00000121178 850 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Col2a1P28481 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Col2a1P28481 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.09□□□□□ -1.92
Col2a1P28481 Gm27044-201ENSMUST00000183033 796 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Col2a1P28481 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.09□□□□□ -1.92
Col2a1P28481 Gm44392-201ENSMUST00000196758 115 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Gm44844-201ENSMUST00000207242 336 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Gm5358-201ENSMUST00000212814 353 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Col2a1P28481 Gm25810-201ENSMUST00000082752 108 ntBASIC3.09□□□□□ -1.92
Col2a1P28481 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Col2a1P28481 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col2a1P28481 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col2a1P28481 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col2a1P28481 Mir294-201ENSMUST00000104710 84 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 Gm11446-201ENSMUST00000121319 866 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.08□□□□□ -1.92
Col2a1P28481 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.08□□□□□ -1.92
Col2a1P28481 Gm25820-201ENSMUST00000198589 127 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 Gm44030-201ENSMUST00000204865 432 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 Gm18039-201ENSMUST00000217816 728 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 Gm46996-201ENSMUST00000220924 408 ntBASIC3.08□□□□□ -1.92
Col2a1P28481 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col2a1P28481 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col2a1P28481 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm22709-201ENSMUST00000116893 111 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm14554-201ENSMUST00000119548 661 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm23819-201ENSMUST00000158744 109 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm25642-201ENSMUST00000175137 66 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm44521-201ENSMUST00000206469 217 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm44519-201ENSMUST00000206486 122 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm45588-201ENSMUST00000211213 630 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm18617-201ENSMUST00000222311 259 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col2a1P28481 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Col2a1P28481 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col2a1P28481 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Col2a1P28481 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col2a1P28481 Gm24890-201ENSMUST00000104389 102 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm11363-201ENSMUST00000121672 548 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.06□□□□□ -1.92
Col2a1P28481 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.06□□□□□ -1.92
Col2a1P28481 Gm14368-201ENSMUST00000145305 415 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm16129-201ENSMUST00000152628 486 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm16236-201ENSMUST00000159588 379 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm7582-201ENSMUST00000160831 603 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.06□□□□□ -1.92
Col2a1P28481 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm27786-201ENSMUST00000184337 70 ntBASIC3.06□□□□□ -1.92
Col2a1P28481 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms