Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col1a1P11087 Mir7026-201ENSMUST00000184384 67 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Gm34091-201ENSMUST00000200875 604 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.88□□□□□ -1.95
Col1a1P11087 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col1a1P11087 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col1a1P11087 Gm5653-201ENSMUST00000223393 1337 ntBASIC2.88□□□□□ -1.95
Col1a1P11087 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col1a1P11087 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col1a1P11087 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Gm21990-201ENSMUST00000124692 383 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.87□□□□□ -1.95
Col1a1P11087 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col1a1P11087 Gm38283-201ENSMUST00000193041 695 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Mir497-201ENSMUST00000200557 84 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Gm46389-201ENSMUST00000223199 392 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col1a1P11087 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col1a1P11087 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.87□□□□□ -1.95
Col1a1P11087 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col1a1P11087 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col1a1P11087 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Gm12941-201ENSMUST00000117934 220 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Gm25106-201ENSMUST00000122672 134 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Col1a1P11087 Gm16232-201ENSMUST00000162856 167 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Gm17194-201ENSMUST00000164610 348 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Gm27330-201ENSMUST00000184689 132 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Gm44521-201ENSMUST00000206469 217 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.86□□□□□ -1.95
Col1a1P11087 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC2.86□□□□□ -1.95
Col1a1P11087 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
Col1a1P11087 Mir410-201ENSMUST00000083563 81 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Col1a1P11087 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.86□□□□□ -1.95
Col1a1P11087 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.85□□□□□ -1.95
Col1a1P11087 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm11285-201ENSMUST00000118443 322 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm15785-201ENSMUST00000119145 694 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm13440-201ENSMUST00000121665 496 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm23548-201ENSMUST00000158963 106 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Gm8807-201ENSMUST00000179328 492 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Col1a1P11087 Gm43295-201ENSMUST00000201439 412 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.85□□□□□ -1.95
Col1a1P11087 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col1a1P11087 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.84□□□□□ -1.95
Col1a1P11087 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.84□□□□□ -1.95
Col1a1P11087 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.84□□□□□ -1.95
Col1a1P11087 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.84□□□□□ -1.95
Col1a1P11087 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.84□□□□□ -1.95
Col1a1P11087 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.84□□□□□ -1.95
Col1a1P11087 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.84□□□□□ -1.95
Col1a1P11087 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Col1a1P11087 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.84□□□□□ -1.95
Col1a1P11087 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col1a1P11087 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Col1a1P11087 Gm13862-201ENSMUST00000121220 197 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm14589-201ENSMUST00000121640 727 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Col1a1P11087 Gm26187-201ENSMUST00000157693 101 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm22517-201ENSMUST00000158265 136 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm23005-201ENSMUST00000158950 136 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Mir6363-201ENSMUST00000184880 114 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm19257-201ENSMUST00000186121 183 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Col1a1P11087 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm44559-201ENSMUST00000207177 1012 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.84□□□□□ -1.96
Col1a1P11087 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.84□□□□□ -1.96
Col1a1P11087 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.83□□□□□ -1.96
Col1a1P11087 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Col1a1P11087 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col1a1P11087 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col1a1P11087 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col1a1P11087 Snord14c-201ENSMUST00000101927 86 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.83□□□□□ -1.96
Col1a1P11087 Gm13588-201ENSMUST00000120026 135 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Mir6997-201ENSMUST00000184313 71 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Gm18453-201ENSMUST00000208000 626 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Gm5358-201ENSMUST00000212814 353 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Gm17890-201ENSMUST00000221419 757 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 CT009713.4-201ENSMUST00000224246 272 ntBASIC2.83□□□□□ -1.96
Col1a1P11087 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms