Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.33□□□□□ -1.88
Chmp6P0C0A3 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Gm23738-201ENSMUST00000082828 171 ntBASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Chmp6P0C0A3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm12149-201ENSMUST00000117511 654 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm11367-201ENSMUST00000117802 120 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm13717-201ENSMUST00000119868 365 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm8242-202ENSMUST00000193056 475 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm6590-201ENSMUST00000203343 687 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm45380-201ENSMUST00000210465 315 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Chmp6P0C0A3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm23431-201ENSMUST00000104006 107 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm24982-201ENSMUST00000104456 132 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm14627-201ENSMUST00000118931 567 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm12383-201ENSMUST00000120628 760 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm22561-201ENSMUST00000157331 84 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm25341-201ENSMUST00000157461 268 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm20811-201ENSMUST00000190500 553 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm44076-201ENSMUST00000203072 520 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm7443-201ENSMUST00000206355 378 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Chmp6P0C0A3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm14008-201ENSMUST00000120483 274 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm25047-201ENSMUST00000122667 104 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm18727-201ENSMUST00000185981 553 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm29259-201ENSMUST00000186396 694 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm45316-201ENSMUST00000210128 162 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Chmp6P0C0A3 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Chmp6P0C0A3 Gm25560-201ENSMUST00000104606 176 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms