Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm16017-201ENSMUST00000119834 208 ntBASIC3.41□□□□□ -1.86
ClppO88696 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm14578-201ENSMUST00000122166 391 ntBASIC3.41□□□□□ -1.86
ClppO88696 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.41□□□□□ -1.86
ClppO88696 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ClppO88696 Gm23168-201ENSMUST00000157156 143 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm23123-201ENSMUST00000157648 144 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm24727-201ENSMUST00000158231 144 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm23775-201ENSMUST00000158991 249 ntBASIC3.41□□□□□ -1.86
ClppO88696 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ClppO88696 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ClppO88696 Gm28148-201ENSMUST00000186924 697 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm29452-201ENSMUST00000187996 313 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm28860-201ENSMUST00000188103 313 ntBASIC3.41□□□□□ -1.86
ClppO88696 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.41□□□□□ -1.86
ClppO88696 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.41□□□□□ -1.86
ClppO88696 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm44395-201ENSMUST00000197056 153 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.41□□□□□ -1.86
ClppO88696 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm44058-201ENSMUST00000204335 467 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.41□□□□□ -1.86
ClppO88696 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.41□□□□□ -1.86
ClppO88696 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ClppO88696 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.41□□□□□ -1.86
ClppO88696 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.41□□□□□ -1.86
ClppO88696 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.41□□□□□ -1.86
ClppO88696 Gm26121-201ENSMUST00000083364 162 ntBASIC3.41□□□□□ -1.86
ClppO88696 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ClppO88696 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ClppO88696 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ClppO88696 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.4□□□□□ -1.86
ClppO88696 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ClppO88696 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.4□□□□□ -1.86
ClppO88696 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
ClppO88696 Gm23532-201ENSMUST00000104569 112 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm14825-201ENSMUST00000113538 701 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm12025-201ENSMUST00000117768 144 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm12858-201ENSMUST00000121913 208 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm22960-201ENSMUST00000122517 104 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.4□□□□□ -1.87
ClppO88696 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm4761-201ENSMUST00000178086 582 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm6900-201ENSMUST00000178971 342 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.4□□□□□ -1.87
ClppO88696 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.4□□□□□ -1.87
ClppO88696 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.4□□□□□ -1.87
ClppO88696 Gm6947-201ENSMUST00000186254 78 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.4□□□□□ -1.87
ClppO88696 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
ClppO88696 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.4□□□□□ -1.87
ClppO88696 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.4□□□□□ -1.87
ClppO88696 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.4□□□□□ -1.87
ClppO88696 Gm18410-201ENSMUST00000207199 577 ntBASIC3.4□□□□□ -1.87
ClppO88696 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.4□□□□□ -1.87
ClppO88696 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Gm17872-201ENSMUST00000222550 532 ntBASIC3.4□□□□□ -1.87
ClppO88696 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ClppO88696 Gm22293-201ENSMUST00000083314 109 ntBASIC3.4□□□□□ -1.87
ClppO88696 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
ClppO88696 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ClppO88696 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ClppO88696 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
ClppO88696 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ClppO88696 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.4□□□□□ -1.87
ClppO88696 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
ClppO88696 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.39□□□□□ -1.87
ClppO88696 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ClppO88696 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ClppO88696 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ClppO88696 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ClppO88696 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm24273-201ENSMUST00000102332 164 ntBASIC3.39□□□□□ -1.87
ClppO88696 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ClppO88696 Gm24127-201ENSMUST00000104110 130 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm23609-201ENSMUST00000104542 127 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm14517-201ENSMUST00000119040 337 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm13273-201ENSMUST00000119737 159 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm13059-201ENSMUST00000119881 398 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm13574-201ENSMUST00000120482 394 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.39□□□□□ -1.87
ClppO88696 Gm27592-201ENSMUST00000157729 126 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm24730-201ENSMUST00000158228 117 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm22766-201ENSMUST00000158372 99 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm25519-201ENSMUST00000158392 127 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm22174-201ENSMUST00000175050 125 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm22692-201ENSMUST00000175055 125 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm27634-201ENSMUST00000175060 126 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm22460-201ENSMUST00000175269 124 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm25535-201ENSMUST00000175364 125 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm24365-201ENSMUST00000175384 125 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm44310-201ENSMUST00000175424 126 ntBASIC3.39□□□□□ -1.87
ClppO88696 Snord92-201ENSMUST00000175548 85 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm22639-201ENSMUST00000175591 125 ntBASIC3.39□□□□□ -1.87
ClppO88696 Gm24979-201ENSMUST00000178626 126 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms