Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm8744-201ENSMUST00000204475 3581 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm14897-201ENSMUST00000118213 207 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm6574-201ENSMUST00000120037 362 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm23670-201ENSMUST00000157469 119 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm29013-201ENSMUST00000187431 237 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm3489-201ENSMUST00000190083 528 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm18327-201ENSMUST00000202426 830 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm44212-201ENSMUST00000205016 897 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Mir127-201ENSMUST00000093568 70 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col5a1O88207 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm10997-201ENSMUST00000210294 1500 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Col5a1O88207 Snora36b-201ENSMUST00000104383 132 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm24907-201ENSMUST00000116932 128 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm13439-201ENSMUST00000117541 409 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm13406-201ENSMUST00000121991 256 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.5□□□□□ -2.01
Col5a1O88207 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC2.5□□□□□ -2.01
Col5a1O88207 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm21991-201ENSMUST00000180006 508 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm26585-201ENSMUST00000180890 630 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm44137-201ENSMUST00000203670 367 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm45878-201ENSMUST00000211839 241 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Gm21089-201ENSMUST00000215843 325 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col5a1O88207 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.5□□□□□ -2.01
Col5a1O88207 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col5a1O88207 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.5□□□□□ -2.01
Col5a1O88207 Mir682-201ENSMUST00000102281 96 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm25109-201ENSMUST00000122474 114 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm34091-201ENSMUST00000200875 604 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm18026-201ENSMUST00000222789 727 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm9174-201ENSMUST00000078149 255 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm22423-201ENSMUST00000082861 184 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col5a1O88207 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm11221-201ENSMUST00000117230 597 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm14930-201ENSMUST00000118864 652 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm15785-201ENSMUST00000119145 694 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm11350-201ENSMUST00000121436 870 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm22226-201ENSMUST00000157355 109 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm26487-201ENSMUST00000158022 94 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 Gm44845-201ENSMUST00000208773 335 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.49□□□□□ -2.01
Col5a1O88207 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.49□□□□□ -2.01
Col5a1O88207 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Col5a1O88207 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Col5a1O88207 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col5a1O88207 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Col5a1O88207 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col5a1O88207 Gm23950-201ENSMUST00000104026 129 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm14506-201ENSMUST00000121165 536 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm12956-201ENSMUST00000122184 414 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col5a1O88207 Gm23633-201ENSMUST00000175293 119 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm27399-201ENSMUST00000184250 78 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm43704-201ENSMUST00000196164 496 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm6590-201ENSMUST00000203343 687 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm44161-201ENSMUST00000203532 253 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm19540-201ENSMUST00000221843 810 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Gm25202-201ENSMUST00000082838 191 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col5a1O88207 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col5a1O88207 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.48□□□□□ -2.01
Col5a1O88207 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Col5a1O88207 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col5a1O88207 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms