Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm23264-201ENSMUST00000083372 107 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm23942-201ENSMUST00000101956 107 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm26396-201ENSMUST00000104093 132 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm9850-201ENSMUST00000117916 227 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm6245-201ENSMUST00000164699 768 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Mir8119-201ENSMUST00000183371 129 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm6615-201ENSMUST00000199426 631 ntBASIC2.31□□□□□ -2.04
Cacna1bO55017 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cacna1bO55017 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cacna1bO55017 Gm6444-201ENSMUST00000119611 458 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm17194-201ENSMUST00000164610 348 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm18558-201ENSMUST00000186253 1214 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm21006-201ENSMUST00000196930 667 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.3□□□□□ -2.04
Cacna1bO55017 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cacna1bO55017 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cacna1bO55017 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cacna1bO55017 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cacna1bO55017 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm12513-201ENSMUST00000118617 352 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm7592-201ENSMUST00000160674 627 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Gm16318-201ENSMUST00000162402 601 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.3□□□□□ -2.04
Cacna1bO55017 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
Cacna1bO55017 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Cacna1bO55017 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cacna1bO55017 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cacna1bO55017 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm27470-201ENSMUST00000184070 210 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Mir6418-201ENSMUST00000185075 115 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm43104-201ENSMUST00000197234 311 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 AC123064.2-201ENSMUST00000217758 193 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.29□□□□□ -2.04
Cacna1bO55017 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm14930-201ENSMUST00000118864 652 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm11344-201ENSMUST00000122011 335 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm25902-201ENSMUST00000158493 318 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm24177-201ENSMUST00000158927 131 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm17183-201ENSMUST00000171170 493 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm26983-201ENSMUST00000182051 388 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm27160-201ENSMUST00000184837 199 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm20561-201ENSMUST00000188131 292 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm43765-201ENSMUST00000196303 893 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.29□□□□□ -2.04
Cacna1bO55017 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.29□□□□□ -2.04
Cacna1bO55017 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
Cacna1bO55017 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm24889-201ENSMUST00000104388 132 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm12090-201ENSMUST00000118692 758 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm14655-201ENSMUST00000120124 578 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm6565-201ENSMUST00000121217 438 ntBASIC2.28□□□□□ -2.04
Cacna1bO55017 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Cacna1bO55017 Gm23043-201ENSMUST00000157890 109 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms