Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm26922-201ENSMUST00000082687 72 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Abca4O35600 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Abca4O35600 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm22361-201ENSMUST00000158435 176 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm44431-201ENSMUST00000203500 413 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.36□□□□□ -2.03
Abca4O35600 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Abca4O35600 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Abca4O35600 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Abca4O35600 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.36□□□□□ -2.03
Abca4O35600 Gm24858-201ENSMUST00000158058 323 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Abca4O35600 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Abca4O35600 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.35□□□□□ -2.03
Abca4O35600 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Abca4O35600 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.35□□□□□ -2.03
Abca4O35600 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Abca4O35600 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Abca4O35600 Gm13349-201ENSMUST00000118436 411 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm23957-201ENSMUST00000157209 90 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm6245-201ENSMUST00000164699 768 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm23967-201ENSMUST00000175062 78 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm28628-201ENSMUST00000187006 264 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm28629-201ENSMUST00000187309 263 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.35□□□□□ -2.03
Abca4O35600 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Abca4O35600 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.35□□□□□ -2.03
Abca4O35600 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.35□□□□□ -2.03
Abca4O35600 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Abca4O35600 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Abca4O35600 Gm28794-201ENSMUST00000185276 136 ntBASIC2.34□□□□□ -2.03
Abca4O35600 Gm43083-201ENSMUST00000199594 476 ntBASIC2.34□□□□□ -2.03
Abca4O35600 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.34□□□□□ -2.03
Abca4O35600 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.34□□□□□ -2.03
Abca4O35600 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Abca4O35600 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Abca4O35600 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Abca4O35600 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Abca4O35600 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Abca4O35600 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.34□□□□□ -2.04
Abca4O35600 Gm27786-201ENSMUST00000184337 70 ntBASIC2.34□□□□□ -2.04
Abca4O35600 Gm43440-201ENSMUST00000201957 729 ntBASIC2.34□□□□□ -2.04
Abca4O35600 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Gm14448-201ENSMUST00000116383 210 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm14939-201ENSMUST00000120347 680 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm14589-201ENSMUST00000121640 727 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Abca4O35600 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.33□□□□□ -2.04
Abca4O35600 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Gm26024-201ENSMUST00000158657 322 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm21959-201ENSMUST00000178439 452 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm37293-201ENSMUST00000191658 295 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm28724-202ENSMUST00000194218 295 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm38334-201ENSMUST00000195060 313 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Abca4O35600 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.33□□□□□ -2.04
Abca4O35600 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.33□□□□□ -2.04
Abca4O35600 AC154838.2-201ENSMUST00000226602 747 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm25581-201ENSMUST00000083410 164 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Abca4O35600 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Abca4O35600 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm12495-201ENSMUST00000119750 447 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm15267-201ENSMUST00000120888 464 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm26187-201ENSMUST00000157693 101 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm44181-201ENSMUST00000203106 483 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm45105-201ENSMUST00000207824 397 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm22864-201ENSMUST00000083950 130 ntBASIC2.33□□□□□ -2.04
Abca4O35600 Gm22673-201ENSMUST00000104415 131 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC2.32□□□□□ -2.04
Abca4O35600 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Gm14527-201ENSMUST00000179300 639 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Gm26993-201ENSMUST00000182766 789 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Gm1833-201ENSMUST00000191608 682 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.32□□□□□ -2.04
Abca4O35600 Gm44030-201ENSMUST00000204865 432 ntBASIC2.32□□□□□ -2.04
Abca4O35600 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms