Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44181-201ENSMUST00000203106 483 ntBASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm7204-201ENSMUST00000062591 600 ntBASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm2878-201ENSMUST00000170173 486 ntBASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Col6a3E9PWQ3 Gm26301-201ENSMUST00000104813 95 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm4052-201ENSMUST00000220890 451 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm22225-201ENSMUST00000157358 278 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm24930-201ENSMUST00000158315 83 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Mir448-201ENSMUST00000083516 112 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Gm24445-201ENSMUST00000083981 107 ntBASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Col6a3E9PWQ3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Gm25090-201ENSMUST00000104000 132 ntBASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Gm22716-201ENSMUST00000177596 107 ntBASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Gm37996-201ENSMUST00000191859 367 ntBASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Mir21a-201ENSMUST00000083521 92 ntBASIC2.46□□□□□ -2.01
Col6a3E9PWQ3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm42758-201ENSMUST00000202146 283 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm44521-201ENSMUST00000206469 217 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm42993-201ENSMUST00000196856 7325 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm26421-201ENSMUST00000104279 132 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm23179-201ENSMUST00000158693 304 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm44030-201ENSMUST00000204865 432 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Gm18387-201ENSMUST00000220333 702 ntBASIC2.46□□□□□ -2.02
Col6a3E9PWQ3 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Gm37625-201ENSMUST00000194969 4872 ntBASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Col6a3E9PWQ3 Gm24984-201ENSMUST00000104454 133 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms