Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37617-201ENSMUST00000194309 159 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37791-201ENSMUST00000195081 286 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43478-201ENSMUST00000200381 292 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43227-201ENSMUST00000202239 677 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44332-201ENSMUST00000203712 433 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44223-201ENSMUST00000204854 114 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45796-201ENSMUST00000212483 114 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23452-201ENSMUST00000083327 107 ntBASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm44120-201ENSMUST00000203022 3023 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm14125-201ENSMUST00000113442 680 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm16082-201ENSMUST00000115992 377 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm9308-201ENSMUST00000119073 448 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm11913-201ENSMUST00000119094 336 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm14939-201ENSMUST00000120347 680 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm4916-201ENSMUST00000126139 642 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm10075-201ENSMUST00000162030 545 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm24968-201ENSMUST00000179817 107 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm27161-201ENSMUST00000183960 562 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm29259-201ENSMUST00000186396 694 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm29576-201ENSMUST00000188020 678 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm28354-201ENSMUST00000190904 678 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm37684-201ENSMUST00000192779 355 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm6680-201ENSMUST00000192789 950 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm37239-201ENSMUST00000193510 141 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm18429-201ENSMUST00000198707 421 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm39147-201ENSMUST00000211376 465 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm25856-201ENSMUST00000082786 75 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm25792-201ENSMUST00000083289 100 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
Trav11A0A0B4J1J9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm22658-201ENSMUST00000104196 155 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm14811-201ENSMUST00000117070 117 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm13087-201ENSMUST00000118298 256 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm5937-201ENSMUST00000119715 643 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm14129-201ENSMUST00000122436 291 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm22204-201ENSMUST00000122654 327 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm22310-201ENSMUST00000157509 116 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm23098-201ENSMUST00000157552 299 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm23112-201ENSMUST00000158606 125 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Gm43659-201ENSMUST00000200894 628 ntBASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.26□□□□□ -2.05
Trav11A0A0B4J1J9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms