Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm22521-201ENSMUST00000158272 134 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm19030-201ENSMUST00000194947 552 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm18384-201ENSMUST00000195974 808 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm36776-201ENSMUST00000207006 203 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 CT030705.1-201ENSMUST00000223971 533 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm22939-201ENSMUST00000103958 131 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm25764-201ENSMUST00000104092 134 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm14880-201ENSMUST00000117581 292 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm11843-201ENSMUST00000118984 425 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm14901-201ENSMUST00000119001 283 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm9440-201ENSMUST00000119667 539 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm23600-201ENSMUST00000157260 71 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm20718-201ENSMUST00000176058 259 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm35570-201ENSMUST00000198730 681 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm43550-201ENSMUST00000200597 303 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm18327-201ENSMUST00000202426 830 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm7540-201ENSMUST00000219764 926 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 AC122465.3-201ENSMUST00000221644 355 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 CT030166.1-201ENSMUST00000222654 357 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 AC132446.1-201ENSMUST00000222655 226 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 AC107453.2-201ENSMUST00000227714 655 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm37848-201ENSMUST00000195288 3103 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.81□□□□□ -2.12
Trav8-1A0A075B641 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm43665-201ENSMUST00000198672 1659 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm2288-201ENSMUST00000118560 638 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm14791-201ENSMUST00000119061 1166 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm5392-201ENSMUST00000122189 789 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm24190-201ENSMUST00000157976 216 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Mir1927-201ENSMUST00000158579 109 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm25977-201ENSMUST00000158697 85 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm29045-201ENSMUST00000187278 698 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm28060-201ENSMUST00000191554 189 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm32340-201ENSMUST00000192883 259 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm37817-201ENSMUST00000195276 434 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm43489-201ENSMUST00000196810 993 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm42625-201ENSMUST00000198611 922 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm43932-201ENSMUST00000204499 52 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm44118-201ENSMUST00000204665 229 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm44594-201ENSMUST00000208982 407 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm45273-201ENSMUST00000211559 281 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC160016.1-201ENSMUST00000215589 448 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC172751.1-201ENSMUST00000226887 440 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC102603.1-201ENSMUST00000227481 584 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm23850-201ENSMUST00000083830 169 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm24446-201ENSMUST00000083982 156 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.8□□□□□ -2.12
Trav8-1A0A075B641 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav8-1A0A075B641 Gm23577-201ENSMUST00000103950 110 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms