Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Gm26064-201ENSMUST00000083381 109 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Mir804-201ENSMUST00000103251 95 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm5384-201ENSMUST00000120313 463 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm18520-201ENSMUST00000174783 658 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm29884-201ENSMUST00000218403 453 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm4263-202ENSMUST00000221392 667 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 LOC667541-201ENSMUST00000223408 278 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm23455-201ENSMUST00000083331 100 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm22444-201ENSMUST00000093693 108 ntBASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm14163-201ENSMUST00000117342 217 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm22322-201ENSMUST00000157151 111 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm18505-201ENSMUST00000187360 790 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm17967-201ENSMUST00000195319 647 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm16383-201ENSMUST00000118122 232 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm15951-201ENSMUST00000118377 400 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm2288-201ENSMUST00000118560 638 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm12587-201ENSMUST00000120180 427 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm23792-201ENSMUST00000122557 93 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm25185-201ENSMUST00000157754 96 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm24213-201ENSMUST00000158255 258 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm3025-201ENSMUST00000163454 489 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm2878-201ENSMUST00000170173 486 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Mir3965-201ENSMUST00000175570 69 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm24520-201ENSMUST00000179510 110 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm3010-201ENSMUST00000198805 448 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm43478-201ENSMUST00000200381 292 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms