Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
Col13a1Q9R1N9 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col13a1Q9R1N9 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Mir599-201ENSMUST00000102378 88 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Mir467g-201ENSMUST00000116906 120 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm14647-201ENSMUST00000119392 680 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm15364-201ENSMUST00000119618 585 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm14926-201ENSMUST00000120650 508 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm12007-201ENSMUST00000120978 597 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm14821-201ENSMUST00000121975 435 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm23837-201ENSMUST00000122656 286 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm22791-201ENSMUST00000157232 145 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm25339-201ENSMUST00000157458 232 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm6632-201ENSMUST00000168425 954 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm24968-201ENSMUST00000179817 107 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm22633-201ENSMUST00000179834 107 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm26866-201ENSMUST00000180414 802 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm26960-201ENSMUST00000182263 412 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm8599-201ENSMUST00000193033 457 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm5285-201ENSMUST00000193089 666 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm7692-201ENSMUST00000213534 409 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.14□□□□□ -1.75
Col13a1Q9R1N9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm24889-201ENSMUST00000104388 132 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm11408-201ENSMUST00000117889 519 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm11196-201ENSMUST00000119052 395 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm16106-201ENSMUST00000119187 294 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm14861-201ENSMUST00000119451 455 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm15142-201ENSMUST00000121013 856 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm11229-201ENSMUST00000121993 437 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm24534-201ENSMUST00000157949 291 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm7925-201ENSMUST00000166690 401 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm24464-201ENSMUST00000179697 107 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm27190-201ENSMUST00000184890 542 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm28058-201ENSMUST00000186421 264 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm43144-201ENSMUST00000198256 485 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm43405-201ENSMUST00000198642 337 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm44161-201ENSMUST00000203532 253 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm44871-201ENSMUST00000207821 497 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Mecom-201ENSMUST00000061088 348 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm25592-201ENSMUST00000082635 131 ntBASIC4.13□□□□□ -1.75
Col13a1Q9R1N9 Gm23464-201ENSMUST00000083145 147 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms