Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm24532-201ENSMUST00000157951 286 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm17194-201ENSMUST00000164610 348 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm23289-201ENSMUST00000175615 108 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm27535-201ENSMUST00000183814 157 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm27470-201ENSMUST00000184070 210 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Gm5374-201ENSMUST00000222868 657 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn11aQ9R053 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn11aQ9R053 AC133934.2-201ENSMUST00000221729 4129 ntBASIC3.1□□□□□ -1.91
Scn11aQ9R053 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm44680-201ENSMUST00000208414 2910 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm13728-201ENSMUST00000117471 400 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm15074-201ENSMUST00000117603 936 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm13349-201ENSMUST00000118436 411 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm23889-201ENSMUST00000122689 104 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Snord53-201ENSMUST00000175146 78 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm44703-201ENSMUST00000205724 248 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Gm7753-201ENSMUST00000221007 867 ntBASIC3.09□□□□□ -1.91
Scn11aQ9R053 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.92
Scn11aQ9R053 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Scn11aQ9R053 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.09□□□□□ -1.92
Scn11aQ9R053 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn11aQ9R053 Gm15785-201ENSMUST00000119145 694 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Gm14159-201ENSMUST00000119832 451 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Gm15974-201ENSMUST00000159103 531 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.08□□□□□ -1.92
Scn11aQ9R053 Gm5268-201ENSMUST00000189212 940 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.08□□□□□ -1.92
Scn11aQ9R053 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn11aQ9R053 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
Scn11aQ9R053 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm24890-201ENSMUST00000104389 102 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm23424-201ENSMUST00000103889 110 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm16017-201ENSMUST00000119834 208 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Mir6363-201ENSMUST00000184880 114 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm28639-201ENSMUST00000191519 481 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm44490-201ENSMUST00000198566 127 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 AC211878.5-201ENSMUST00000221697 409 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Gm26072-201ENSMUST00000083135 107 ntBASIC3.07□□□□□ -1.92
Scn11aQ9R053 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Scn11aQ9R053 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Scn11aQ9R053 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Scn11aQ9R053 Mir542-201ENSMUST00000102186 85 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 Gm24177-201ENSMUST00000158927 131 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Scn11aQ9R053 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Scn11aQ9R053 Gm46996-201ENSMUST00000220924 408 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 Gm46389-201ENSMUST00000223199 392 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Scn11aQ9R053 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Scn11aQ9R053 AF357341-201ENSMUST00000083088 75 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.06□□□□□ -1.92
Scn11aQ9R053 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm23980-201ENSMUST00000157135 158 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Mir3087-201ENSMUST00000199405 56 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm45150-201ENSMUST00000206051 467 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm22423-201ENSMUST00000082861 184 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm24670-201ENSMUST00000104154 132 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm15933-201ENSMUST00000117215 616 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm14876-201ENSMUST00000120795 327 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm16355-201ENSMUST00000128606 231 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm24436-201ENSMUST00000157889 302 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm16236-201ENSMUST00000159588 379 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm8580-201ENSMUST00000160295 464 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms