Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm13803-201ENSMUST00000117547 489 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm14352-201ENSMUST00000119250 449 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm16445-201ENSMUST00000120399 714 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm11797-201ENSMUST00000121336 754 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm5958-201ENSMUST00000147698 297 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm24876-201ENSMUST00000158780 92 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm23053-201ENSMUST00000175136 96 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm26915-201ENSMUST00000183080 748 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm28975-201ENSMUST00000186412 686 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm37866-201ENSMUST00000191950 696 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm18384-201ENSMUST00000195974 808 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm45192-201ENSMUST00000206749 283 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm36776-201ENSMUST00000207006 203 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm7588-201ENSMUST00000216866 571 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm26176-201ENSMUST00000083795 105 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem3Q9JKE1 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm25466-201ENSMUST00000103995 132 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm14389-201ENSMUST00000140453 241 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm26088-201ENSMUST00000157896 131 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm27698-201ENSMUST00000184060 249 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm7870-201ENSMUST00000184467 616 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm43478-201ENSMUST00000200381 292 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm19253-201ENSMUST00000204279 307 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm43932-201ENSMUST00000204499 52 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm44964-201ENSMUST00000207011 273 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm44824-201ENSMUST00000207021 229 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm45742-201ENSMUST00000212400 433 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.25□□□□□ -2.05
Trem3Q9JKE1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm24951-201ENSMUST00000102182 109 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm14897-201ENSMUST00000118213 207 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm11693-201ENSMUST00000119625 565 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm12042-201ENSMUST00000120479 301 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm24443-201ENSMUST00000157242 132 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm22651-201ENSMUST00000157872 94 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm25977-201ENSMUST00000158697 85 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms