Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm22750-201ENSMUST00000102076 103 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm24122-201ENSMUST00000104107 132 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm12739-201ENSMUST00000119769 382 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm13717-201ENSMUST00000119868 365 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm21809-201ENSMUST00000178495 468 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm37438-201ENSMUST00000192813 393 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm43601-201ENSMUST00000196294 945 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm18340-201ENSMUST00000196342 609 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn5aQ9JJV9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm11321-201ENSMUST00000121257 902 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm25280-201ENSMUST00000157269 101 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm17164-201ENSMUST00000169013 506 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm38268-201ENSMUST00000195813 193 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm43355-201ENSMUST00000196541 346 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm4052-201ENSMUST00000220890 451 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm25898-201ENSMUST00000158303 106 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm25606-201ENSMUST00000158363 95 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm23777-201ENSMUST00000158994 259 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm25598-201ENSMUST00000179031 107 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Mir6401-201ENSMUST00000184499 109 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm37111-201ENSMUST00000193250 634 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm44395-201ENSMUST00000197056 153 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Gm19233-201ENSMUST00000219772 936 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn5aQ9JJV9 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm9587-201ENSMUST00000172449 454 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm22108-201ENSMUST00000177961 106 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm24798-201ENSMUST00000179334 106 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm3010-201ENSMUST00000198805 448 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm44256-201ENSMUST00000203304 335 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm43992-201ENSMUST00000204358 197 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm44688-201ENSMUST00000209083 537 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm19232-201ENSMUST00000211621 652 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Scn5aQ9JJV9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Scn5aQ9JJV9 Gm14577-201ENSMUST00000121134 256 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms