Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm28404-201ENSMUST00000190242 453 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm19089-201ENSMUST00000197207 613 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm43954-201ENSMUST00000204634 544 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm45735-201ENSMUST00000212779 319 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm18507-201ENSMUST00000218855 525 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm4921-201ENSMUST00000219804 992 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm23133-201ENSMUST00000104255 135 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm26019-201ENSMUST00000104407 119 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm11432-201ENSMUST00000117334 231 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm11262-201ENSMUST00000119326 833 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm6565-201ENSMUST00000121217 438 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm15212-201ENSMUST00000122403 466 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm10444-201ENSMUST00000126708 148 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm25883-201ENSMUST00000157781 271 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm22156-201ENSMUST00000158409 141 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm17946-201ENSMUST00000186856 538 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm37495-201ENSMUST00000194590 264 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm19908-201ENSMUST00000204684 391 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm45048-201ENSMUST00000207058 429 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm18488-201ENSMUST00000215082 364 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 CT009713.9-201ENSMUST00000223604 389 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 AC163295.1-201ENSMUST00000227840 314 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm5548-201ENSMUST00000055878 397 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 mt-Td-201ENSMUST00000082404 70 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm6361-201ENSMUST00000091031 435 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Neat1-201ENSMUST00000173672 20771 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ushbp1Q8R370 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm11372-201ENSMUST00000117348 570 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm11408-201ENSMUST00000117889 519 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm13356-201ENSMUST00000121678 335 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm24836-201ENSMUST00000122609 108 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm22792-201ENSMUST00000157225 133 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm24060-201ENSMUST00000157494 95 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm25999-201ENSMUST00000175398 133 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm26177-201ENSMUST00000178683 107 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Mir7093-201ENSMUST00000184195 101 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm10193-201ENSMUST00000188288 231 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm28151-201ENSMUST00000189404 951 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm42924-201ENSMUST00000197261 185 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Mir129b-201ENSMUST00000197461 65 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm43407-201ENSMUST00000199816 317 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm44125-201ENSMUST00000203068 448 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm44521-201ENSMUST00000206469 217 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 Gm17890-201ENSMUST00000221419 757 ntBASIC4.73□□□□□ -1.65
Ushbp1Q8R370 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms