Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm17183-201ENSMUST00000171170 493 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm25284-201ENSMUST00000180345 141 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm4842-201ENSMUST00000183237 835 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Mir6986-201ENSMUST00000184483 58 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm9443-201ENSMUST00000188406 816 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm44371-201ENSMUST00000204148 467 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm44060-201ENSMUST00000204440 410 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm44523-201ENSMUST00000205616 417 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm3338-201ENSMUST00000220982 269 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Olfr895-201ENSMUST00000093864 951 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.3□□□□□ -1.72
Clrn1Q8K445 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Clrn1Q8K445 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm23594-201ENSMUST00000104307 134 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm14852-201ENSMUST00000120065 647 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm4852-201ENSMUST00000121202 729 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm26312-201ENSMUST00000157769 165 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm26180-201ENSMUST00000179942 107 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm23925-202ENSMUST00000188429 132 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm37881-201ENSMUST00000193001 421 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm43825-201ENSMUST00000199650 734 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm44092-201ENSMUST00000204470 258 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm19096-201ENSMUST00000209705 766 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm26263-201ENSMUST00000083281 164 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm24764-201ENSMUST00000083686 199 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm5670-201ENSMUST00000093546 372 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.29□□□□□ -1.72
Clrn1Q8K445 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Clrn1Q8K445 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm25943-201ENSMUST00000103791 90 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm12255-201ENSMUST00000117184 284 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm11673-201ENSMUST00000117846 331 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm14972-201ENSMUST00000121780 364 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm23579-201ENSMUST00000158528 103 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm23977-201ENSMUST00000177871 74 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm25285-201ENSMUST00000178951 90 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm23793-201ENSMUST00000179396 117 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms