Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm12509-201ENSMUST00000118033 609 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm14815-201ENSMUST00000120060 488 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm26988-201ENSMUST00000183296 945 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm27828-201ENSMUST00000184108 119 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm28666-201ENSMUST00000186649 274 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm44879-201ENSMUST00000207007 503 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm45048-201ENSMUST00000207058 429 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Syne4Q8CII8 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.44□□□□□ -1.7
Syne4Q8CII8 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Mir673-201ENSMUST00000102361 91 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm12433-201ENSMUST00000119659 255 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm15177-201ENSMUST00000120491 577 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm13743-201ENSMUST00000121486 724 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm23118-201ENSMUST00000122657 187 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm23198-201ENSMUST00000158811 91 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm25835-201ENSMUST00000158917 144 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm26194-201ENSMUST00000175036 71 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm23619-201ENSMUST00000178411 94 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm25474-201ENSMUST00000179052 94 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm22047-201ENSMUST00000179176 94 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm24520-201ENSMUST00000179510 110 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm37817-201ENSMUST00000195276 434 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm43407-201ENSMUST00000199816 317 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm44355-201ENSMUST00000200417 104 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm45420-201ENSMUST00000211243 425 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm31849-201ENSMUST00000220306 375 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm46994-201ENSMUST00000221523 219 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Mir30e-201ENSMUST00000083475 92 ntBASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Syne4Q8CII8 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm13064-201ENSMUST00000119125 557 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm13482-201ENSMUST00000119842 254 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm11704-201ENSMUST00000120031 214 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm11359-201ENSMUST00000120039 567 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm14915-201ENSMUST00000120747 204 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm14559-201ENSMUST00000121745 496 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm23312-201ENSMUST00000158774 102 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm9613-201ENSMUST00000171662 196 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Gm24315-201ENSMUST00000177835 127 ntBASIC4.42□□□□□ -1.7
Syne4Q8CII8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms