Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm17155-201ENSMUST00000165969 473 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm25451-201ENSMUST00000177832 121 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm23619-201ENSMUST00000178411 94 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm25474-201ENSMUST00000179052 94 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm22047-201ENSMUST00000179176 94 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Mir6996-201ENSMUST00000183922 61 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm37119-201ENSMUST00000195691 389 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm43114-201ENSMUST00000198298 343 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm45439-201ENSMUST00000211723 359 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Vps53Q8CCB4 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm7219-201ENSMUST00000119619 297 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm13868-201ENSMUST00000122411 294 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm22236-201ENSMUST00000157093 106 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm23957-201ENSMUST00000157209 90 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm22166-201ENSMUST00000178419 121 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm23288-201ENSMUST00000179213 121 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Mir6401-201ENSMUST00000184499 109 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm28625-201ENSMUST00000188309 205 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm28872-201ENSMUST00000191518 158 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm37054-201ENSMUST00000193481 543 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm6303-201ENSMUST00000210123 471 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm18113-201ENSMUST00000220630 303 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm23447-201ENSMUST00000082798 163 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.66□□□□□ -1.66
Vps53Q8CCB4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.65□□□□□ -1.66
Vps53Q8CCB4 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm22472-201ENSMUST00000104115 134 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm14835-201ENSMUST00000119039 315 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm13482-201ENSMUST00000119842 254 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm7916-201ENSMUST00000120325 456 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm11321-201ENSMUST00000121257 902 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm11281-201ENSMUST00000141391 576 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm23499-201ENSMUST00000157736 268 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm26001-201ENSMUST00000157989 103 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm24850-201ENSMUST00000158029 119 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm6486-201ENSMUST00000166202 434 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm17153-201ENSMUST00000171314 490 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Mir1251-201ENSMUST00000175486 84 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm27313-201ENSMUST00000183500 142 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm45367-201ENSMUST00000210171 347 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm45796-201ENSMUST00000212483 114 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm29774-201ENSMUST00000219270 436 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Vps53Q8CCB4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms