Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trub1Q8C0D0 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm23942-201ENSMUST00000101956 107 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm16331-201ENSMUST00000144274 498 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm24240-201ENSMUST00000157785 135 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm18225-201ENSMUST00000216708 742 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trub1Q8C0D0 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.8□□□□□ -1.96
Trub1Q8C0D0 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm14907-201ENSMUST00000121948 854 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Mir8103-201ENSMUST00000183945 107 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm37193-201ENSMUST00000193087 513 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm30341-201ENSMUST00000194363 289 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm43992-201ENSMUST00000204358 197 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm4528-201ENSMUST00000207905 551 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.79□□□□□ -1.96
Trub1Q8C0D0 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Trub1Q8C0D0 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm25539-201ENSMUST00000116886 122 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm11221-201ENSMUST00000117230 597 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm12782-201ENSMUST00000117519 727 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm11285-201ENSMUST00000118443 322 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm12787-201ENSMUST00000119234 396 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm13574-201ENSMUST00000120482 394 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm26027-201ENSMUST00000122725 268 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm27527-201ENSMUST00000183903 99 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm19257-201ENSMUST00000186121 183 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm29525-201ENSMUST00000189844 699 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm37418-201ENSMUST00000195031 274 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm43239-201ENSMUST00000200131 201 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm19244-201ENSMUST00000204340 253 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.78□□□□□ -1.96
Trub1Q8C0D0 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trub1Q8C0D0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Trub1Q8C0D0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm14518-201ENSMUST00000117351 542 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm15001-201ENSMUST00000117657 795 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm12412-201ENSMUST00000121867 328 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm22600-201ENSMUST00000157598 269 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms