Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm23193-201ENSMUST00000102427 82 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm24469-201ENSMUST00000104487 131 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm7164-201ENSMUST00000117503 450 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm8129-201ENSMUST00000118230 213 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm7219-201ENSMUST00000119619 297 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm23169-201ENSMUST00000157157 112 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm6214-201ENSMUST00000178845 541 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm23523-201ENSMUST00000180190 107 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm27883-201ENSMUST00000183941 102 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm27490-201ENSMUST00000184754 128 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm29031-201ENSMUST00000185316 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm29000-201ENSMUST00000185444 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm28204-201ENSMUST00000185934 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm28290-201ENSMUST00000186505 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm28161-201ENSMUST00000186669 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm28749-209ENSMUST00000189599 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm37682-201ENSMUST00000191776 522 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm33163-201ENSMUST00000194504 614 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm43405-201ENSMUST00000198642 337 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm44655-201ENSMUST00000207768 423 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Mecom-201ENSMUST00000061088 348 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.37□□□□□ -1.55
Trim56Q80VI1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm22676-201ENSMUST00000116972 129 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm12255-201ENSMUST00000117184 284 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm24499-201ENSMUST00000158446 104 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm25902-201ENSMUST00000158493 318 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm23638-201ENSMUST00000175073 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm23158-201ENSMUST00000175076 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm22907-201ENSMUST00000175198 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm22625-201ENSMUST00000175382 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm22875-201ENSMUST00000175449 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm25197-201ENSMUST00000175516 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm27857-201ENSMUST00000176930 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm26268-201ENSMUST00000177685 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm26430-201ENSMUST00000178054 107 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm23681-201ENSMUST00000178821 126 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm4842-201ENSMUST00000183237 835 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm28995-201ENSMUST00000186625 261 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm37167-201ENSMUST00000194946 396 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm18551-201ENSMUST00000195594 642 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm19252-201ENSMUST00000204705 305 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.36□□□□□ -1.55
Trim56Q80VI1 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim56Q80VI1 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm24240-201ENSMUST00000157785 135 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Mir1947-201ENSMUST00000158235 85 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Mir6481-201ENSMUST00000184617 110 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm37878-201ENSMUST00000192108 387 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm4734-201ENSMUST00000200117 777 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm6112-201ENSMUST00000208037 629 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm25134-201ENSMUST00000082646 160 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm22350-201ENSMUST00000083924 156 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Gm25821-201ENSMUST00000093657 133 ntBASIC5.35□□□□□ -1.55
Trim56Q80VI1 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim56Q80VI1 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms