Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm8666-201ENSMUST00000117517 292 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm14107-201ENSMUST00000117774 330 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm13478-201ENSMUST00000118312 413 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm12486-201ENSMUST00000120887 541 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm14101-201ENSMUST00000121502 473 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm24901-201ENSMUST00000158125 110 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm24905-201ENSMUST00000158129 104 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm17183-201ENSMUST00000171170 493 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm21754-201ENSMUST00000177550 479 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm8023-201ENSMUST00000195298 903 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm19649-201ENSMUST00000201126 822 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm44295-201ENSMUST00000203805 437 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm44818-201ENSMUST00000206608 358 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm2676-201ENSMUST00000207279 606 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm9309-201ENSMUST00000223537 546 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm18441-201ENSMUST00000223539 617 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm7984-201ENSMUST00000060640 538 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm10042-201ENSMUST00000079884 78 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ubfd1Q78JW9 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm23744-201ENSMUST00000104231 149 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm14656-201ENSMUST00000120342 502 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm13406-201ENSMUST00000121991 256 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm11834-201ENSMUST00000122257 585 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm23206-201ENSMUST00000122720 184 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm26001-201ENSMUST00000157989 103 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm24850-201ENSMUST00000158029 119 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Npn2-202ENSMUST00000189275 235 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm37732-201ENSMUST00000194377 316 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 AC116589.4-201ENSMUST00000222390 216 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Gm9762-201ENSMUST00000036976 444 ntBASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ubfd1Q78JW9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ubfd1Q78JW9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms