Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Mir3569-201ENSMUST00000185080 58 ntBASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 Gm21006-201ENSMUST00000196930 667 ntBASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 Gm18871-201ENSMUST00000218655 745 ntBASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Topbp1Q6ZQF0 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm7421-201ENSMUST00000119298 639 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm7365-201ENSMUST00000120877 639 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm24212-201ENSMUST00000158258 132 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Topbp1Q6ZQF0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm23424-201ENSMUST00000103889 110 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm14589-201ENSMUST00000121640 727 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm22264-201ENSMUST00000178200 107 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm43655-201ENSMUST00000197367 222 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Gm43512-201ENSMUST00000198495 176 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.52□□□□□ -1.85
Topbp1Q6ZQF0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm25094-201ENSMUST00000103992 131 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm43587-201ENSMUST00000199590 204 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm8274-201ENSMUST00000219820 463 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm17890-201ENSMUST00000221419 757 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.51□□□□□ -1.85
Topbp1Q6ZQF0 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm26411-201ENSMUST00000157668 107 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Mir410-201ENSMUST00000083563 81 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.5□□□□□ -1.85
Topbp1Q6ZQF0 Gm23063-201ENSMUST00000102350 93 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm15785-201ENSMUST00000119145 694 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm22803-201ENSMUST00000158049 283 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm18327-201ENSMUST00000202426 830 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Gm15933-201ENSMUST00000117215 616 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Mir322-201ENSMUST00000083484 95 ntBASIC3.49□□□□□ -1.85
Topbp1Q6ZQF0 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Snord53-201ENSMUST00000175146 78 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Mir6406-201ENSMUST00000183592 120 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Gm28974-201ENSMUST00000187893 231 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Gm6615-201ENSMUST00000199426 631 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Gm46389-201ENSMUST00000223199 392 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Topbp1Q6ZQF0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 Gm22192-201ENSMUST00000175128 85 ntBASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 Gm18346-201ENSMUST00000216782 325 ntBASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.47□□□□□ -1.85
Topbp1Q6ZQF0 Olfr844-201ENSMUST00000054106 930 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms