Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm23957-201ENSMUST00000157209 90 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm25667-201ENSMUST00000157701 275 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm27428-201ENSMUST00000184289 110 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm7142-201ENSMUST00000194232 586 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm38356-201ENSMUST00000194313 408 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm43043-201ENSMUST00000196579 412 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm6064-201ENSMUST00000203999 454 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm43954-201ENSMUST00000204634 544 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim27Q62158 Gm5175-202ENSMUST00000219699 529 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim27Q62158 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim27Q62158 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim27Q62158 Gm10242-201ENSMUST00000090064 330 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm10161-201ENSMUST00000091506 204 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim27Q62158 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim27Q62158 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.12□□□□□ -1.75
Trim27Q62158 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim27Q62158 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm24120-201ENSMUST00000103978 129 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm11367-201ENSMUST00000117802 120 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm11429-201ENSMUST00000119089 144 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm13873-201ENSMUST00000119208 427 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm14008-201ENSMUST00000120483 274 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm14506-201ENSMUST00000121165 536 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm16412-201ENSMUST00000121602 273 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Snrpert-201ENSMUST00000121967 279 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim27Q62158 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm24008-201ENSMUST00000157733 138 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm25519-201ENSMUST00000158392 127 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm10177-202ENSMUST00000161698 207 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm10075-201ENSMUST00000162030 545 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm20673-201ENSMUST00000177167 430 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm7909-201ENSMUST00000182688 614 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm20162-201ENSMUST00000193629 871 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm37576-201ENSMUST00000194228 372 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm21007-201ENSMUST00000221024 326 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.11□□□□□ -1.75
Trim27Q62158 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim27Q62158 Snora7a-201ENSMUST00000082629 140 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim27Q62158 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim27Q62158 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.11□□□□□ -1.75
Trim27Q62158 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm25213-201ENSMUST00000102388 113 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm25727-201ENSMUST00000104522 131 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm23530-201ENSMUST00000104564 137 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm11874-201ENSMUST00000117437 130 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm11829-201ENSMUST00000121003 282 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm14768-201ENSMUST00000122126 678 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm27861-201ENSMUST00000183920 214 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm38076-201ENSMUST00000193889 450 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm37817-201ENSMUST00000195276 434 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm18433-202ENSMUST00000195682 196 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm42621-201ENSMUST00000198114 275 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm44076-201ENSMUST00000203072 520 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr936-202ENSMUST00000216912 937 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm18921-201ENSMUST00000221798 366 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim27Q62158 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim27Q62158 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm10237-201ENSMUST00000078393 273 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim27Q62158 Gm25131-201ENSMUST00000082653 151 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm23939-201ENSMUST00000082880 133 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm25126-201ENSMUST00000083343 102 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.1□□□□□ -1.75
Trim27Q62158 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim27Q62158 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim27Q62158 Gm14880-201ENSMUST00000117581 292 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms