Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.03□□□□□ -1.92
Six4Q61321 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.03□□□□□ -1.92
Six4Q61321 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.03□□□□□ -1.92
Six4Q61321 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.03□□□□□ -1.92
Six4Q61321 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.03□□□□□ -1.92
Six4Q61321 AC158388.1-201ENSMUST00000225441 256 ntBASIC3.03□□□□□ -1.92
Six4Q61321 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.03□□□□□ -1.92
Six4Q61321 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.03□□□□□ -1.92
Six4Q61321 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Six4Q61321 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Six4Q61321 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Six4Q61321 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Six4Q61321 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.03□□□□□ -1.92
Six4Q61321 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Six4Q61321 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Six4Q61321 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm25647-201ENSMUST00000101832 78 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm25823-201ENSMUST00000101995 78 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm25308-201ENSMUST00000104171 158 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm22019-201ENSMUST00000104359 96 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm24376-201ENSMUST00000104399 127 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm13504-201ENSMUST00000117490 316 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm9432-201ENSMUST00000117810 759 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm14971-201ENSMUST00000117980 663 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm7071-201ENSMUST00000120458 462 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm15147-201ENSMUST00000122263 483 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm22961-201ENSMUST00000157964 106 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm24220-201ENSMUST00000177753 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm25988-201ENSMUST00000177759 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Mir5123-201ENSMUST00000177794 83 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm23471-201ENSMUST00000177886 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm26488-201ENSMUST00000178225 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm23449-201ENSMUST00000179208 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm25221-201ENSMUST00000180051 79 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Six4Q61321 Mir7047-201ENSMUST00000184595 64 ntBASIC3.02□□□□□ -1.93
Six4Q61321 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm45860-201ENSMUST00000212700 334 ntBASIC3.02□□□□□ -1.93
Six4Q61321 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm46233-201ENSMUST00000217831 449 ntBASIC3.02□□□□□ -1.93
Six4Q61321 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.02□□□□□ -1.93
Six4Q61321 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Six4Q61321 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Six4Q61321 Mir21a-201ENSMUST00000083521 92 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Olfr203-201ENSMUST00000089305 924 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.02□□□□□ -1.93
Six4Q61321 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Six4Q61321 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Six4Q61321 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Mir499-201ENSMUST00000102357 79 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm22023-201ENSMUST00000104354 130 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm7123-201ENSMUST00000117647 213 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm14607-201ENSMUST00000119119 491 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm13574-201ENSMUST00000120482 394 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Gm23716-201ENSMUST00000157348 144 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 Gm18415-201ENSMUST00000177464 647 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 Gm21893-201ENSMUST00000179119 397 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm24520-201ENSMUST00000179510 110 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Gm44857-201ENSMUST00000208331 196 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.01□□□□□ -1.93
Six4Q61321 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Six4Q61321 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Six4Q61321 Gm22005-201ENSMUST00000082795 141 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.01□□□□□ -1.93
Six4Q61321 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Six4Q61321 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Six4Q61321 Gm14415-201ENSMUST00000118260 1578 ntBASIC3□□□□□ -1.93
Six4Q61321 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Six4Q61321 Gm42483-201ENSMUST00000197556 1742 ntBASIC3□□□□□ -1.93
Six4Q61321 Gm42684-201ENSMUST00000197663 3615 ntBASIC3□□□□□ -1.93
Six4Q61321 Gm24982-201ENSMUST00000104456 132 ntBASIC3□□□□□ -1.93
Six4Q61321 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3□□□□□ -1.93
Six4Q61321 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Six4Q61321 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3□□□□□ -1.93
Six4Q61321 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3□□□□□ -1.93
Six4Q61321 Gm25555-201ENSMUST00000158078 111 ntBASIC3□□□□□ -1.93
Six4Q61321 Gm22764-201ENSMUST00000158370 92 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms