Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm43264-201ENSMUST00000202284 325 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm44754-201ENSMUST00000208155 400 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm5175-202ENSMUST00000219699 529 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm22622-201ENSMUST00000082870 129 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.19□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm15399-201ENSMUST00000118055 724 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm22107-201ENSMUST00000122548 100 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm14562-201ENSMUST00000129885 543 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm26411-201ENSMUST00000157668 107 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm24736-201ENSMUST00000158862 130 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm20526-201ENSMUST00000173416 158 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm27330-201ENSMUST00000184689 132 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm45105-201ENSMUST00000207824 397 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm45879-201ENSMUST00000212521 392 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm18043-201ENSMUST00000216741 739 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm25699-201ENSMUST00000082896 167 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.18□□□□□ -2.06
Trav6d-4Q5R1I0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm6574-201ENSMUST00000120037 362 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm9890-201ENSMUST00000171867 537 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm15143-201ENSMUST00000178180 714 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm6615-201ENSMUST00000199426 631 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm43368-201ENSMUST00000200638 409 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm36247-201ENSMUST00000211834 285 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm10343-201ENSMUST00000096279 348 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.17□□□□□ -2.06
Trav6d-4Q5R1I0 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm24541-201ENSMUST00000103871 96 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm11943-201ENSMUST00000119473 327 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm12071-201ENSMUST00000121968 469 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Mir6917-201ENSMUST00000184111 61 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm44519-201ENSMUST00000206486 122 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 AC161520.1-201ENSMUST00000210954 939 ntBASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav6d-4Q5R1I0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms