Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trav5d-4Q5R1F6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trav5d-4Q5R1F6 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm13504-201ENSMUST00000117490 316 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm25360-201ENSMUST00000178786 191 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm5551-201ENSMUST00000199720 690 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm7751-201ENSMUST00000212868 709 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm18892-201ENSMUST00000217628 881 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trav5d-4Q5R1F6 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm22939-201ENSMUST00000103958 131 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm9009-201ENSMUST00000117321 326 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm8260-201ENSMUST00000119230 353 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm12495-201ENSMUST00000119750 447 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm7071-201ENSMUST00000120458 462 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm14101-201ENSMUST00000121502 473 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm13901-201ENSMUST00000137252 468 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm26277-201ENSMUST00000157097 152 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm16111-201ENSMUST00000162128 285 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm25748-201ENSMUST00000175487 70 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm26915-201ENSMUST00000183080 748 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Mir7658-201ENSMUST00000184043 57 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43214-201ENSMUST00000199242 352 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm18193-201ENSMUST00000210017 772 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm25202-201ENSMUST00000082838 191 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trav5d-4Q5R1F6 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Snord14c-201ENSMUST00000101927 86 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm25466-201ENSMUST00000103995 132 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm14448-201ENSMUST00000116383 210 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm14716-201ENSMUST00000120138 718 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm11797-201ENSMUST00000121336 754 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm24787-201ENSMUST00000157380 123 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm23865-201ENSMUST00000157723 97 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43384-201ENSMUST00000200569 637 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm44688-201ENSMUST00000209083 537 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm26176-201ENSMUST00000083795 105 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.44□□□□□ -2.02
Trav5d-4Q5R1F6 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm25308-201ENSMUST00000104171 158 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm24403-201ENSMUST00000104616 130 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm13349-201ENSMUST00000118436 411 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm5958-201ENSMUST00000147698 297 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm28314-201ENSMUST00000191276 345 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms